| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0326 |
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| Symbol | |
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| ID | 5604649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 377644 |
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| End bp | 379758 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640935831 |
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| Product | putative plasmid transfer protein |
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| Protein accession | YP_001476564 |
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| Protein GI | 157368575 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0141312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATC GCCACGTTAT GGAAGCGTTG CTGCGCCCGG CAGTCGAATT GAATACAGCG
ATTGTGGCCG GCGCCGCAGC CGCCATTTGT TTTGTTGCCC CCTGGTCAGT GGCATTGGCG
CCGTCGGTGA GTTATGTCAC TGCCGGCGGG TTTGCGGTGC TGTCTGCGGT ACGGGCACGT
CAGGGCCTGC GGGTGATCCG TTACCGCCGT AATCTGCGCC GACTGCCGCG GTATGTCATG
ACCAGCGCAC AAATACCGGT TAGCCGGCAG CGGCTGTTCC TGGGGCGGGG TTTTCGCTGG
CAGCAAAAGC ACACCCAGCG TCTGATGGAC ACCCGTCGTC CAGAGGTTGA GAAGTATGTT
CAGCCACCGC AGCTGTACCA GATGGCGCGG CGCCTGGAGC TTAAAACTGA ATACACCCTG
CCGTGGTTGT CCCAACTGCT GCGCAAGGAT TCCCCACTCA ACCCGGTACG GCCGCTGCCG
CCAGTGGGTG GCAATCCGGC GATCCACGGC ATCGAACCTG ACGAGCTCGA TGTTTCGATG
GCCTTAGGCG AACGTGTTGG CCACAGCCTG GTGTTGGGTA CTACGCGTGT TGGCAAAACG
CGCCTCGCCG AGTTGCTGAT CACTCAGGAT ATTCGCCGCG GAGACATCAC TATTGTATTT
GATCCAAAAG GCGATGCGGA CTTGCTGCGG CGTGTCTGGG CTGAAGCCCA CCGTGCCGGC
CGGGGGGATG AGCTGTTCAT CTTCCATCTG GGTTGGCCGG ATATCTCTGC ACGCTATAAC
GCCGTCGGTC GCTTTGAACG GGTATCGGAA GTCGCTGGCC GTATCTCCGG GCAGTTGAGT
GGGGAGGGCA ACAGTGCGGC ATTCCGCGAG TTTGCCTGGC GATTCGTCAA CATCGTCGCA
CGAGCCCTGG TCGCGTTGGG GCAGCGACCG GACTACACCC TCATCACCCG CTATGTGAAC
AACATCAGCG AACTGTATGA GACCTACGCG AAAAAGGTGA TTGAAACGCG TATGCCGGCA
CTGCAGCAGC AGATAGATAA CAACCTGAAG GTGCTGACGG AGGAGGACGT GCCGCGCAAC
ATGCAGGGAC AACCGAACGC GGTCAAAATA TTCGCTGTTG AAATGGCCCT GAGCTCGGAA
GCTGGCAAGC AGCTGTACGA CCCTATCCTG GATGGCTTGC GCTCAGCCGT GCGCTATGAC
CGTACCTATT TCGATAAAAT TGTAGCGTCC TTGCTGCCTC TGCTGGAAAA ACTCACCACC
GGCAAGACCG CAGAGCTGCT GGCACCGAAC TATATGGACA TGAATGACCC CCGGCCGATA
TTTGACTGGG AGCAGGTCAT TCGCAAGCGC GGCATTGTTT ATGTCGGGCT GGATGCTTTG
TCCGACGGTG TGGTCGCCTC TGCCGTCGGC AACAGCATGT TTGCTGACCT GGTGTCAGTG
GCCGGCCATA TCTATAAACA CGGCATGCAT GGCGGGCTAC CTACTCGTGC CGACGGCAGG
CTGCCGATCA ATCTGCACTG TGATGAGTTT AACGAGCTCA TGGGCGACGA ATTTATCCCT
CTCATCAACA AAGGCGGTGG CGCCGGCATG CAAGTGACGG CTTACACGCA AACCGAGTCG
GACATCGAGG CCCGCATTGG GAGCACAGCT AAGGCGGCCC AGGTCACGGG TAACTTCAAT
ACCCTGATCA TGCTGCGGGT GCGTGAGAAT CGGACCGCAC AGTTGCTGAC GACACAGCTC
CCGGAGGTCG ATGCCTACAC CAAAACTCTG GTGTCGGGGC ACGCCGATAC GGCCGACGTC
GAGAAAGGGC AGGACTTCAC GTCCAGCACT CAGGATCGCG TTGGTACGGT GAAAACGCCG
CTGCTGATGC CGGCGGATGT GATCAACCTG CCGAAGGGGC AGGCGTTCGC GTTACTGGAA
GGCGGGCAGT TGTGGAAAAT TCGGATGCCC TTACCCAGTG GGGATGGCGA TGATGAGTTG
ATGCCACCTA ACCTAGAGAA GATTGCCGAG GAGATGCAGC GCAATTACCG GACCAGTGAA
TCCTGGTGGT CAGCCAGCAC GGTAATGCCT GATGCGGTCA TAAAAGGGGG ACTGAATGTC
ACAAGCGGTG AATAA
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| Protein sequence | MSNRHVMEAL LRPAVELNTA IVAGAAAAIC FVAPWSVALA PSVSYVTAGG FAVLSAVRAR
QGLRVIRYRR NLRRLPRYVM TSAQIPVSRQ RLFLGRGFRW QQKHTQRLMD TRRPEVEKYV
QPPQLYQMAR RLELKTEYTL PWLSQLLRKD SPLNPVRPLP PVGGNPAIHG IEPDELDVSM
ALGERVGHSL VLGTTRVGKT RLAELLITQD IRRGDITIVF DPKGDADLLR RVWAEAHRAG
RGDELFIFHL GWPDISARYN AVGRFERVSE VAGRISGQLS GEGNSAAFRE FAWRFVNIVA
RALVALGQRP DYTLITRYVN NISELYETYA KKVIETRMPA LQQQIDNNLK VLTEEDVPRN
MQGQPNAVKI FAVEMALSSE AGKQLYDPIL DGLRSAVRYD RTYFDKIVAS LLPLLEKLTT
GKTAELLAPN YMDMNDPRPI FDWEQVIRKR GIVYVGLDAL SDGVVASAVG NSMFADLVSV
AGHIYKHGMH GGLPTRADGR LPINLHCDEF NELMGDEFIP LINKGGGAGM QVTAYTQTES
DIEARIGSTA KAAQVTGNFN TLIMLRVREN RTAQLLTTQL PEVDAYTKTL VSGHADTADV
EKGQDFTSST QDRVGTVKTP LLMPADVINL PKGQAFALLE GGQLWKIRMP LPSGDGDDEL
MPPNLEKIAE EMQRNYRTSE SWWSASTVMP DAVIKGGLNV TSGE
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