Gene Spro_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0323 
Symbol 
ID5604709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp375841 
End bp376533 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content62% 
IMG OID640935828 
Productlytic transglycosylase catalytic 
Protein accessionYP_001476561 
Protein GI157368572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00170183 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACACTC GCCGCGTTCT GACCCGGGGG CTATTGCCCC TGCTTGCCTT CCTCACTTCT 
GTGGGGGGCG GAGCCGTTCA TGCTGCTACC CAGCAGGTCC CTTCCGGTTA TCGGGAGGTG
GCGTTGCGTC ATGGGGTTCC TCCGGAGTCC CTGTATTCGG TGGCGTTGGC CGAGACATCG
ATGGCGCCGA AAAGCATCGT CTCGGTGACC CGCGGCGCCG GTCCGGCTCC GGATGTGGAG
CGCCCCTGGC CCTGGACCAT CAATGTTGCG GGTAAAGGGT ATCGCTATGC CAGCCGACTG
CAGGCGTGGG AAGCCTTGCA GCGTTTTTTG AAAACACATC CTCGCAAGCG CATCGATGTC
GGAATTGCCC AGGTCAATCT GGGCTGGAAC GGCCATCACT TTACGTCGAC CTGGGCGGCG
TTTGATCCGT ACACCAATCT CAACGCGGCG GCGGCCATCC TGCGGGAATG CTATGACCGC
AATCCTGGGA GTTGGCTGAC CGCAGCCGGC TGCTATCACC ACCCTGCCGG CGGTGCGCCC
GCTGCCCGGT ATAAATCTAT TGTGAGTGGC AAGCTGGCAC GCCTAAACGG CAGGGCGTCT
GACCTGCCCC GGGTGGCCAG TACAACCCCC ACGGCCACGA CATTACCGGC ACAAACGGCC
GCACTGACCT GGATTGAACC ACGGAGCCAA TAA
 
Protein sequence
MDTRRVLTRG LLPLLAFLTS VGGGAVHAAT QQVPSGYREV ALRHGVPPES LYSVALAETS 
MAPKSIVSVT RGAGPAPDVE RPWPWTINVA GKGYRYASRL QAWEALQRFL KTHPRKRIDV
GIAQVNLGWN GHHFTSTWAA FDPYTNLNAA AAILRECYDR NPGSWLTAAG CYHHPAGGAP
AARYKSIVSG KLARLNGRAS DLPRVASTTP TATTLPAQTA ALTWIEPRSQ