Gene Spro_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0310 
Symbol 
ID5605906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp364529 
End bp366568 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content58% 
IMG OID640935815 
ProductDNA topoisomerase III 
Protein accessionYP_001476548 
Protein GI157368559 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA 
TIGRFAM ID[TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000929429 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAACTCT ACCTGTGCGA AAAACCCAGT CAGGGTAAAG ATATCGGCGC CATTCTCGGG 
GCGACGCAGC GAAAACAGGG TTACCTGGCG GGCGCTGGCG TGATAGTCAC CTGGGCTATA
GGGCATCTGC TGGAACAGGC CCAGCCGGAG ACCTACGGTG AGCAGTTCGG CAGTCCCTGG
CGGGAGTCCG TTCTTCCTAT TGTCCCTACC CAGTGGAAAA TGGCGGTAAA AAAAGACACT
GCCGACCAGT TCGCTGTTAT CCGCGGGTTG CTCAAACAGG TTGATTCTGT GGTGATTGCG
ACCGATGCGG ATCGCGAGGG GGAAGTGATC GCGCGGGAGT TACTGGAACA TTGCCACTTT
ACCGGCCCGG TCCAGCGGCT CTGGTTGTCA GCGCTGGACG AGGCCAGTAT TCGGCATGCC
CTGGCGAACA AACTCCCTGG CGAGAAGACC GCGCCCCTGT ATGAAGCTGG CCTGGCGCGA
TCACGTGCTG ACTGGATGAC GGGGATGAAT TTAACCCGGC TTTATACGCT CAAAGCCCGT
GAGCAGGGAT ACGGCGAGGT ATTGTCGATC GGGCGGGTGC AGACCCCCAC GCTGGCGCTG
GTCGTGAACC GAGACCGCGA CATTACCAAC TTCATCTCCA AACCGTACTG GCAAGTCAGG
GCCACGCTGC AAAAAGGCGG GATCACTTTC CCGGCAAACT GGGTACCAGC CGCCAACTAC
TGTGATGAAG AGAAGCGCTG TATTCAACAG AATGTGGCGC AGGCCGTCGT GCAGCGGTGT
CAGCAAACGG CTCATGCCGT TGTGCTTGAG GTGGGGACCG AGCGCAAGAA AGAGTCCGCG
CCGTTGGCAT TTGATCTGGG CACCCTGCAG CAGGCTTGCT CCCGCAAGTG GGGGATGAGC
GCCAACCAGG TCTTGAGTAT CGCACAGTCA CTGTATGAGA CGCACAAGGC CACCACATAT
CCCCGGACGG ATTGCGGCTA TCTGCCGACA TCGATGCGGG AAGAGGTTGC CGATGTGCTG
AGCGCTGTTA CCCGCACGGA CCCAACGCTC AACGAAAGCG TGGCCAGGCT CGACAGGGCT
TTTGTTTCCC GTATCTGGAA TGACAAAAAA ATTACGGCGC ACCACGGGAT TATCCCAACC
AAACAGCCGT TCGACCTGAG CAAGTTGTCA GCCGATGAGC TCAAGGTCTA TCAGCTGATC
CGTCAGCATT ACCTGGCACA GTACCTGTCC TTACATGAAG TAGATGTGAC GGAAGCCACC
TTCAATATCG GCGGGCAACT GTTCCGCACC CGCGGCAAGG TCGAGGCTGT TGCTGGATGG
AAAGTGTTGT TCCAGCATGA CGTGAGCGAG GCGAAAGAGG AACCGGCTGA CACGGATGAT
GTCCGGCTGC CGGCGCTGGT TAAAGGGGAA ACCGTCGCGG TAGCCGGCGC TGAGCTCAAA
ACGTTGCAGA CGAAGCCCCC AGGACATTTC ACCGACGGGA CACTGATCGC CGCCATGAAA
AATGCAGCGG CGTTCGTCAG TGACCCGCAA CTGAAGAAAG TGTTGAAAGA GAACGCAGGG
CTGGGTACTG AAGCGACGCG CGCCGGTATC CTGGATACGC TGTTTAAACG CGGGTACCTG
GAGAAGAAGG GCAAATACCT ACTCTCCACA CCGATCGCCG GCGAACTGAT TGATGCGTTA
CCGACTGCGC TGACCAACCC CGGGATGACG GCGCTGTGGG AGCAGGCGCT GGACGAGATT
GCCCAGGGCC AGATGACACT CGATACGTTC ATGAGCCGCC AGGCACAGTG GACAGGGCAT
CTGGTGGAGA AAGGGAAGAC GCAGGCTGTG AAGTTTACCG CCCCACCTTC ACCGCCGTGC
CCGACATGCA GTGGGTCGAT GCGCCGGCGT GCCGGCAAGA AAGGCGGTGG TGCTTTCTGG
GGCTGCAGTA ATTATCCCAC TTGCCAGGGT GTCATTAACA TCGATGCAAA AGGTGGGCGC
AAGGCTAAGC GCTATAAAGC GAAATCACCG ACTAAAAATA AAGCAACAGG ATCGGAGTAA
 
Protein sequence
MQLYLCEKPS QGKDIGAILG ATQRKQGYLA GAGVIVTWAI GHLLEQAQPE TYGEQFGSPW 
RESVLPIVPT QWKMAVKKDT ADQFAVIRGL LKQVDSVVIA TDADREGEVI ARELLEHCHF
TGPVQRLWLS ALDEASIRHA LANKLPGEKT APLYEAGLAR SRADWMTGMN LTRLYTLKAR
EQGYGEVLSI GRVQTPTLAL VVNRDRDITN FISKPYWQVR ATLQKGGITF PANWVPAANY
CDEEKRCIQQ NVAQAVVQRC QQTAHAVVLE VGTERKKESA PLAFDLGTLQ QACSRKWGMS
ANQVLSIAQS LYETHKATTY PRTDCGYLPT SMREEVADVL SAVTRTDPTL NESVARLDRA
FVSRIWNDKK ITAHHGIIPT KQPFDLSKLS ADELKVYQLI RQHYLAQYLS LHEVDVTEAT
FNIGGQLFRT RGKVEAVAGW KVLFQHDVSE AKEEPADTDD VRLPALVKGE TVAVAGAELK
TLQTKPPGHF TDGTLIAAMK NAAAFVSDPQ LKKVLKENAG LGTEATRAGI LDTLFKRGYL
EKKGKYLLST PIAGELIDAL PTALTNPGMT ALWEQALDEI AQGQMTLDTF MSRQAQWTGH
LVEKGKTQAV KFTAPPSPPC PTCSGSMRRR AGKKGGGAFW GCSNYPTCQG VINIDAKGGR
KAKRYKAKSP TKNKATGSE