Gene Spro_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0287 
SymbolhemE 
ID5607063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp329323 
End bp330387 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content60% 
IMG OID640935786 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001476525 
Protein GI157368536 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.844287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0137069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGT TGAAGAACGA TCGCTACCTG CGCGCACTGC TGCGTCAGCC GGTGGATGTG 
ACCCCTGTAT GGATGATGCG TCAGGCCGGT CGTTATTTGC CGGAGTACAA GGCCACCCGC
GCCCAGGCCG GGGATTTCAT GTCGCTATGC AAGAACGCGG AGCTGGCTTG TGAAGTCACG
CTGCAGCCGC TGCGCCGTTT CCCACTGGAC GCGGCGATCC TGTTCTCCGA TATCCTCACC
ATTCCCGATG CCATGGGGCT GGGCCTGTAT TTCGAAACCG GTGAAGGTCC GCGTTTCTCC
TCGCCTATCA CCAGTCGTGC CGATGTCGAC AAGCTACCGG CGTTCGACCC GGAAGTGGAG
CTGGGTTATG TGATGAACGC AGTGCGTACC ATCCGTCGCG AGCTGAAGGG CGAAGTGCCG
CTGATCGGTT TCTCAGGCAG TCCGTGGACG CTGGCGACCT ATATGGTGGA AGGCGGTAGC
AGCAAGGCCT TCACCAAACT GAAAAAAATG ATGTACGCCG AGCCGGCGAC GTTGCACCTG
CTGTTGGATA AGCTGGCAGA CAGCGTCATT TTGTATCTTA ACGCCCAGAT TAAAGCCGGC
GCGCAGTCGG TGATGGTGTT CGATACCTGG GGCGGCGTGC TGACCGGTCG TGACTACCGC
GAGTTCTCAC TGCATTACAT GCACAAGATT GTTGACGGCC TGCTGCGTGA AAACGACGGC
CGCCGTGTGC CGGTCACGCT GTTCACCAAA GGTGGCGGCC AGTGGCTGGA GGCGATGGCG
GCAACCGGTT GTGACGCACT GGGTCTTGAC TGGACGACCG ATATTGCCGA TGCACGCCGT
CGCGTAGGGG ACAAAGTGGC ACTGCAGGGC AACATGGACC CTTCGATGCT GTATGCGTCA
CCGGAGCGCA TCGGCCAGGA AGTGGAAACC ATTCTGGCCG GTTTCGGCCA CGGCGAAGGG
CATGTGTTCA ACCTGGGCCA CGGTATTCAC CCGGACGTGC CGCCGGAAAA CGCCGGTGCC
TTTGTTGAGG CAGTCCACGC GCAGTCGGGG AAATACCATC GTTAA
 
Protein sequence
MNELKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT 
LQPLRRFPLD AAILFSDILT IPDAMGLGLY FETGEGPRFS SPITSRADVD KLPAFDPEVE
LGYVMNAVRT IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKAFTKLKKM MYAEPATLHL
LLDKLADSVI LYLNAQIKAG AQSVMVFDTW GGVLTGRDYR EFSLHYMHKI VDGLLRENDG
RRVPVTLFTK GGGQWLEAMA ATGCDALGLD WTTDIADARR RVGDKVALQG NMDPSMLYAS
PERIGQEVET ILAGFGHGEG HVFNLGHGIH PDVPPENAGA FVEAVHAQSG KYHR