Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0287 |
Symbol | hemE |
ID | 5607063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 329323 |
End bp | 330387 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640935786 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001476525 |
Protein GI | 157368536 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.844287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0137069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGT TGAAGAACGA TCGCTACCTG CGCGCACTGC TGCGTCAGCC GGTGGATGTG ACCCCTGTAT GGATGATGCG TCAGGCCGGT CGTTATTTGC CGGAGTACAA GGCCACCCGC GCCCAGGCCG GGGATTTCAT GTCGCTATGC AAGAACGCGG AGCTGGCTTG TGAAGTCACG CTGCAGCCGC TGCGCCGTTT CCCACTGGAC GCGGCGATCC TGTTCTCCGA TATCCTCACC ATTCCCGATG CCATGGGGCT GGGCCTGTAT TTCGAAACCG GTGAAGGTCC GCGTTTCTCC TCGCCTATCA CCAGTCGTGC CGATGTCGAC AAGCTACCGG CGTTCGACCC GGAAGTGGAG CTGGGTTATG TGATGAACGC AGTGCGTACC ATCCGTCGCG AGCTGAAGGG CGAAGTGCCG CTGATCGGTT TCTCAGGCAG TCCGTGGACG CTGGCGACCT ATATGGTGGA AGGCGGTAGC AGCAAGGCCT TCACCAAACT GAAAAAAATG ATGTACGCCG AGCCGGCGAC GTTGCACCTG CTGTTGGATA AGCTGGCAGA CAGCGTCATT TTGTATCTTA ACGCCCAGAT TAAAGCCGGC GCGCAGTCGG TGATGGTGTT CGATACCTGG GGCGGCGTGC TGACCGGTCG TGACTACCGC GAGTTCTCAC TGCATTACAT GCACAAGATT GTTGACGGCC TGCTGCGTGA AAACGACGGC CGCCGTGTGC CGGTCACGCT GTTCACCAAA GGTGGCGGCC AGTGGCTGGA GGCGATGGCG GCAACCGGTT GTGACGCACT GGGTCTTGAC TGGACGACCG ATATTGCCGA TGCACGCCGT CGCGTAGGGG ACAAAGTGGC ACTGCAGGGC AACATGGACC CTTCGATGCT GTATGCGTCA CCGGAGCGCA TCGGCCAGGA AGTGGAAACC ATTCTGGCCG GTTTCGGCCA CGGCGAAGGG CATGTGTTCA ACCTGGGCCA CGGTATTCAC CCGGACGTGC CGCCGGAAAA CGCCGGTGCC TTTGTTGAGG CAGTCCACGC GCAGTCGGGG AAATACCATC GTTAA
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Protein sequence | MNELKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT LQPLRRFPLD AAILFSDILT IPDAMGLGLY FETGEGPRFS SPITSRADVD KLPAFDPEVE LGYVMNAVRT IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKAFTKLKKM MYAEPATLHL LLDKLADSVI LYLNAQIKAG AQSVMVFDTW GGVLTGRDYR EFSLHYMHKI VDGLLRENDG RRVPVTLFTK GGGQWLEAMA ATGCDALGLD WTTDIADARR RVGDKVALQG NMDPSMLYAS PERIGQEVET ILAGFGHGEG HVFNLGHGIH PDVPPENAGA FVEAVHAQSG KYHR
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