| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0286 |
|---|
| Symbol | nudC |
|---|
| ID | 5607062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 328515 |
|---|
| End bp | 329282 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640935785 |
|---|
| Product | NADH pyrophosphatase |
|---|
| Protein accession | YP_001476524 |
|---|
| Protein GI | 157368535 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0316528 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTG CATTAACGGG TAATGAAAAT GGCTGGTGGA TCGTCAGCCA TGAAAGCAAA
CTTTGGTTAC CGAACGGTGA ATTGCCGTGC GGTTTGGCCG CGTCATTTTC CCTGCTGGGA
AGAATGGCTC GTGTTATTGG CGAATGGGAA GGATTGCCGG TCTGGCTGGT GCGCCACGCA
ATGCCGCAGG AGATGGGATC GGTACGCCAA CTGTTAGAAC TGGATCGCGG GCTGTTCCAG
CTTGCCGGAC GGGGCGTACA ACTGGCCGAG TTTTACCGTT CCCATCGCTA CTGCGGTTAC
TGCGGCCATG AAATGCATCT CAGCCGCACC GAAAGTGCCT GCCTGTGCGG CCACTGCCGG
GAGCGCTACT ACCCGCAGAT CGCCCCCTGC GTGATCGTTG CCATTCGGCG TGACGATGAG
ATCCTGCTGG CACAACATGT GCGCCATCGC GGCGGTATTC ATACCGTACT GGCCGGCTTT
GTCGAGGTTG GCGAAACGCT GGAGCAGGCG GCCGCACGCG AGGTGATGGA AGAAAGTAAT
ATTGAAATCA AAAACCTGCG TTATGTCACC TCACAACCCT GGCCGTTCCC GCACTCGTTG
ATGATGGCCT TTATGGCCGA TTACCACCGC GGCGAGATCC GTCACGATCC GAAAGAGCTG
CTTAACGCCG GTTGGTACCG CTACGATCGG TTGCCGCTAT TACCGCCGCC CGGCACGGTA
GCGCGTCGCC TGATAGAGGA CACCGTAGCC TTATGCCGTG AGCAATAA
|
|---|
| Protein sequence | MELALTGNEN GWWIVSHESK LWLPNGELPC GLAASFSLLG RMARVIGEWE GLPVWLVRHA
MPQEMGSVRQ LLELDRGLFQ LAGRGVQLAE FYRSHRYCGY CGHEMHLSRT ESACLCGHCR
ERYYPQIAPC VIVAIRRDDE ILLAQHVRHR GGIHTVLAGF VEVGETLEQA AAREVMEESN
IEIKNLRYVT SQPWPFPHSL MMAFMADYHR GEIRHDPKEL LNAGWYRYDR LPLLPPPGTV
ARRLIEDTVA LCREQ
|
|---|
| |