| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0278 |
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| Symbol | |
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| ID | 5607012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 317634 |
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| End bp | 321860 |
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| Gene Length | 4227 bp |
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| Protein Length | 1408 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640935777 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001476516 |
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| Protein GI | 157368527 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00498155 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAGACT TATTAAAGTT TCTGAAAGCG CAAACCAAGA CCGAAGAGTT TGACGCGATC
AAGATTGCTC TGGCATCGCC AGACATGATC CGTTCCTGGT CGTTCGGCGA AGTCAAGAAG
CCGGAAACCA TTAACTACCG TACGTTCAAA CCAGAACGTG ACGGCCTTTT CTGCGCCCGT
ATCTTTGGGC CAGTAAAAGA CTACGAGTGC CTGTGCGGTA AGTACAAGCG CTTAAAACAC
CGCGGCGTGA TTTGTGAGAA GTGCGGCGTT GAAGTGACCC AGACCAAAGT ACGCCGTGAG
CGTATGGGGC ACATCGAGCT GGCTTCACCA ACTGCGCACA TCTGGTTCCT GAAATCGCTG
CCATCCCGCA TCGGTTTGCT GCTGGATATG CCGCTGCGTG ACATCGAACG TGTACTGTAC
TTCGAATCCT ATGTGGTTAT CGAAGGCGGT ATGACTAACC TCGAGCGTCG TCAGATCCTG
ACTGAAGAGC AGTATCTGGA TGCGCTGGAA GAGTTCGGTG ATGAATTCGA CGCCAAGATG
GGTGCGGAAG CTATTCAGGC CCTGTTGAAA AACATGGATC TGGAGCAAGA GTGTGAAACT
CTGCGCGAAG AGCTGAACGA AACCAACTCC GAAACCAAGC GTAAGAAGCT GACCAAGCGT
ATCAAGCTGC TGGAAGCGTT CGTACAGTCT GGCAACAAGC CAGAGTGGAT GATCCTGACC
GTGCTGCCGG TACTGCCACC GGATCTGCGT CCGCTGGTGC CGTTGGATGG GGGTCGTTTC
GCGACTTCAG ATCTGAACGA TCTGTATCGC CGCGTGATCA ACCGTAACAA CCGTCTGAAA
CGCCTGCTGG ATCTGGCTGC GCCTGACATC ATCGTGCGCA ACGAAAAGCG TATGCTGCAA
GAAGCGGTAG ATGCCCTGCT GGATAACGGC CGTCGCGGTC GTGCGATCAC CGGTTCCAAC
AAGCGTCCTC TGAAATCTTT GGCCGATATG ATCAAAGGTA AGCAGGGTCG CTTCCGTCAG
AACCTGTTGG GTAAACGTGT TGACTACTCT GGTCGTTCTG TAATCACCGT AGGTCCATAC
CTGCGTCTGC ATCAGTGCGG TCTGCCTAAG AAAATGGCAC TGGAGCTGTT CAAACCGTTC
ATCTACGGCA AGCTGGAACT GCGTGGCCTG GCCACCACCA TCAAAGCCGC CAAGAAAATG
GTTGAGCGTG AAGAAGCTGT CGTTTGGGAC ATCCTGGACG AAGTTATCCG CGAACACCCG
GTACTGCTGA ACCGTGCACC AACCCTGCAC CGTTTGGGTA TCCAGGCATT TGAACCGGTT
CTGATCGAAG GTAAGGCTAT CCAGCTGCAC CCGCTGGTTT GTGCGGCATA CAACGCCGAC
TTCGATGGTG ACCAAATGGC AGTACACGTT CCACTGACGC TTGAAGCTCA GCTGGAAGCG
CGTGCGCTGA TGATGTCTAC CAACAACATC CTGTCACCAG CGAACGGCGA GCCAATCATC
GTTCCTTCTC AGGACGTTGT ATTGGGTCTG TACTACATGA CCCGTGACTG TGTTAACGCC
AAAGGCGAAG GCATGGTGTT GAGTGGCCCG AAAGAAGCGG AGCGTATTTA CCGCGCCGGT
CTGGCTTCTC TGCATGCGCG TGTCAAAGTG CGTATCACCG AAGAGATCAA AAACACCGAA
GGCGAGTCTG TACACCAGAC TTCGATCGTC GACACTACCG TTGGTCGCGC CATCCTGTGG
ATGATCGTAC CGCGCGGTCT GCCGTATTCG ATCGTTAACC AGCCTTTGGG CAAGAAAGCT
ATCTCCAAGA TGCTGAACAC CTGTTACCGC ATCCTGGGCC TGAAGCCGAC CGTTATCTTT
GCTGACCAGA TCATGTACAC CGGTTTTGCT TATGCTGCCC GTTCAGGCGC GTCAGTAGGT
ATCGATGACA TGGTAATCCC TGCCAAGAAA GCAGAGATCA TCGAAGAAGC AGAAACCGAA
GTTGCCGAAA TCCAGGAGCA GTTCCAGTCT GGTTTGGTTA CCGCCGGCGA ACGCTACAAC
AAAGTGATCG ATATCTGGGC CGCAGCGAAC GAACGTGTTG CCAAGGCAAT GATGGAAAAC
TTGTCTGTTG AAGACGTCGT CAACCGTGAC GGTGTTGTTG AACAGCAGGT TTCCTTCAAC
AGTATCTTTA TGATGGCCGA CTCCGGTGCG CGTGGTTCTG CAGCACAGAT TCGTCAGCTG
GCCGGTATGC GTGGCCTGAT GGCCAAGCCG GATGGTTCCA TCATTGAAAC GCCAATCACC
GCGAACTTCC GTGAAGGTCT GAACGTACTC CAGTACTTCA TCTCCACGCA CGGTGCTCGT
AAAGGTTTGG CGGATACCGC ACTGAAAACG GCTAACTCCG GTTATCTGAC CCGTCGTCTG
GTTGACGTGG CGCAGGATCT GGTGGTTACC GAGGACGACT GTGGTACTCA CAACGGCATC
ATGATGACTC CGGTTATCGA AGGTGGTGAC GTTAAAGAGC CACTGCGCGA ACGTGTTCTG
GGTCGTGTGA CAGCAGAAGA TATCATCAAG CCGGGTACGG CTGATATCCT GGTGCCACGT
AACACCCTGC TGCACGAGAA GACTTGTGAC CTGTTGGAAG AAAACTCTGT CGACAGCGTT
AAAGTCCGTT CCGTCGTTAG CTGTGAAACC GACTTTGGTG TGTGTGCAAA CTGCTATGGT
CGCGACCTGG CACGTGGTCA CATCATCAAC AAAGGCGAAG CTATCGGCGT TATCGCGGCA
CAGTCAATCG GTGAGCCGGG TACACAGCTG ACGATGCGTA CGTTCCACAT CGGTGGTGCG
GCATCTCGTG CGGCTGCTGA ATCCAGCATC CAGGTGAAAA ACAAGGGTAC TCTGAAGCTG
AGCAATGTGA AGTTCGTAAT GAACGCCGCA GGCAAGCTGG TGATCACCTC TCGTAACACC
GAACTGAAGC TGATCGACGA ATTCGGCCGT ACTAAAGAAC GCTACAAAGT GCCTTACGGT
TCCGTGATGG GCAAAGGCGA CGGTATGGAA GTTAACGGCG GCGAAACCGT TGCTAACTGG
GATCCGCACA CCATGCCAGT TATCACCGAA GTGAGTGGTT TCATCCGCTT CGCTGATATG
GTTGACGGCC AGACCATTAC CCGCCAGACC GACGAACTGA CCGGTTTGTC TTCTCTGGTA
GTACTGGACA GCGCAGAGCG TACCGGTAGC GGTAAAGACC TGCGTCCGGC ACTGAAAATC
GTTGATGCCA AAGGCGACGA CGTATTGATC CCAGGTACTG ATATGCCTGC TCAATACTTC
CTGCCAGGTA AAGCGATTGT ACAGCTGGAA GACGGCATTC AGATCGGTGC GGGTGATACC
CTGGCGCGTA TTCCTCAGGA ATCCGGCGGT ACCAAGGATA TTACCGGTGG TCTGCCACGC
GTTGCGGATC TGTTCGAAGC ACGTCGTCCG AAAGAGCCGG CAATCCTGGC TGAAATCAGC
GGGATTATCT CGTTCGGTAA AGAGACCAAA GGCAAACGTC GCCTGGTAAT CTCTCCACTG
GACGGCAGCG ATGCGTACGA AGAGATGATT CCAAAATGGC GTCAGCTCAA CGTGTTCGAA
GGTGAAGTTG TGGAACGTGG TGACGTTGTT TCTGACGGCC CAGAATCTCC ACACGACATT
CTGCGTCTGC GTGGTGTGCA TGCGGTTACT CGCTACATCA CCAACGAAGT GCAGGAAGTT
TACCGTCTGC AAGGCGTTAA GATTAACGAT AAACACATTG AAGTTATCGT TCGTCAGATG
CTGCGTAAAG GCACCATCGT TAGCGCTGGT GGCACCGAGT TCCTGGAAGG CGAGCAGGCT
GAAGTGTCTC GCGTTAAGAT TGCCAACCGT CAGCTTGCTG CTGAAGGCAA AATCGAGGCA
ACCTTCTCAC GCGATCTGCT GGGTATCACC AAGGCTTCCT TGGCGACCGA GTCCTTCATC
TCCGCAGCAT CGTTCCAGGA AACGACGCGC GTTCTGACCG AAGCGGCTGT TGCCGGTAAG
CGTGATGAAC TGCGTGGCCT GAAAGAGAAC GTCATCGTGG GCCGTCTGAT CCCAGCCGGT
ACCGGTTACG CTTATCATCA GGACCGCATG CGTCGTAAAG CACAGGGTGA AACGCCAGTT
GTTCCGCAGG TGAGCGCGGA AGAAGCAACG GCTAACCTGG CTGAACTGCT CAATGCAGGC
AACCTGGGTG GCGGCAACAA CGATTAA
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| Protein sequence | MKDLLKFLKA QTKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR
IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL
PSRIGLLLDM PLRDIERVLY FESYVVIEGG MTNLERRQIL TEEQYLDALE EFGDEFDAKM
GAEAIQALLK NMDLEQECET LREELNETNS ETKRKKLTKR IKLLEAFVQS GNKPEWMILT
VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ
EAVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY
LRLHQCGLPK KMALELFKPF IYGKLELRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP
VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA
RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTRDCVNA KGEGMVLSGP KEAERIYRAG
LASLHARVKV RITEEIKNTE GESVHQTSIV DTTVGRAILW MIVPRGLPYS IVNQPLGKKA
ISKMLNTCYR ILGLKPTVIF ADQIMYTGFA YAARSGASVG IDDMVIPAKK AEIIEEAETE
VAEIQEQFQS GLVTAGERYN KVIDIWAAAN ERVAKAMMEN LSVEDVVNRD GVVEQQVSFN
SIFMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR
KGLADTALKT ANSGYLTRRL VDVAQDLVVT EDDCGTHNGI MMTPVIEGGD VKEPLRERVL
GRVTAEDIIK PGTADILVPR NTLLHEKTCD LLEENSVDSV KVRSVVSCET DFGVCANCYG
RDLARGHIIN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA ASRAAAESSI QVKNKGTLKL
SNVKFVMNAA GKLVITSRNT ELKLIDEFGR TKERYKVPYG SVMGKGDGME VNGGETVANW
DPHTMPVITE VSGFIRFADM VDGQTITRQT DELTGLSSLV VLDSAERTGS GKDLRPALKI
VDAKGDDVLI PGTDMPAQYF LPGKAIVQLE DGIQIGAGDT LARIPQESGG TKDITGGLPR
VADLFEARRP KEPAILAEIS GIISFGKETK GKRRLVISPL DGSDAYEEMI PKWRQLNVFE
GEVVERGDVV SDGPESPHDI LRLRGVHAVT RYITNEVQEV YRLQGVKIND KHIEVIVRQM
LRKGTIVSAG GTEFLEGEQA EVSRVKIANR QLAAEGKIEA TFSRDLLGIT KASLATESFI
SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGYAYHQDRM RRKAQGETPV
VPQVSAEEAT ANLAELLNAG NLGGGNND
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