| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0254 |
|---|
| Symbol | |
|---|
| ID | 5606603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 283392 |
|---|
| End bp | 284174 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640935745 |
|---|
| Product | DNase TatD |
|---|
| Protein accession | YP_001476492 |
|---|
| Protein GI | 157368503 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.316946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATA TCGGCGTCAA TCTCACCAGC TCACAATTTG CCAAAGACCG TCCGGCGGTG
GTGGAGCGCG CCCGTGCTGC AGGCGTAACA GGGCTGCTGA TTACCGGTAC CGATCTGCAG
GAGAGCCGTG CAGCCAGTGA ACTGGCGCAA CAGCATGCGA ATTTTTGCTG GTCCACCGCC
GGTGTGCATC CTCACCATGC CAGCAGTTGG GACGAGCGAG TCGCAGAACA AATCTGCGAG
TTAGCCGCCC GGCCACGGGT CGCGGCTATT GGTGAATGTG GGCTGGATTT CAACCGCAAC
TTCTCTACTC CAGAGCAGCA GGAGGCGGCA TTCAGCGCAC AACTGGCGCT GGCGGCAGAG
TTGTCGATGC CGGTTTTTCT TCATTGTCGC GATGCACACG CACGTTTTGC AGCGCTGCTG
GCGCCGTGGT TGGATAAACT GCCCGCGGCC GTGGTGCACT GTTTTACCGG CACCGCCGAA
GAATTGGAAA GCTGCCTGTC GTTAGGCCTG TCGGTGGGTA TTACCGGTTG GGTCTGCGAT
GAGCGGCGTG GCCTGGAACT GCGCGCGTTG CTGCCGCAGA TCCCGGCGGA CCGTCTGTTG
CTGGAAACCG ACGCCCCCTA TCTGTTGCCC CGGGATTTAC TTCCGAAACC CACATCTCGC
CGCAACGAAC CCTGTTTTTT GCCTCATATC GTCCGGCAGG TGGCCGCCTG GCGACAAGAA
GATCCCGAAT GGCTGGGGCA AAAAATCGAT GAGAACGCCC GCCGGCTATT CCGGCTGGAA
TGA
|
|---|
| Protein sequence | MFDIGVNLTS SQFAKDRPAV VERARAAGVT GLLITGTDLQ ESRAASELAQ QHANFCWSTA
GVHPHHASSW DERVAEQICE LAARPRVAAI GECGLDFNRN FSTPEQQEAA FSAQLALAAE
LSMPVFLHCR DAHARFAALL APWLDKLPAA VVHCFTGTAE ELESCLSLGL SVGITGWVCD
ERRGLELRAL LPQIPADRLL LETDAPYLLP RDLLPKPTSR RNEPCFLPHI VRQVAAWRQE
DPEWLGQKID ENARRLFRLE
|
|---|
| |