Gene Spro_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0233 
Symbol 
ID5606421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp262024 
End bp263211 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content59% 
IMG OID640935724 
ProductGntR family transcriptional regulator 
Protein accessionYP_001476471 
Protein GI157368482 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.511167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAG AAGGGTTACT CGCGCAGCGC ATCGTAAAAG TAAAAAGCTC GGCAATTCGT 
GAATTGCTCA AGCACAGTAA GATGGAAAAC GTCATTTCGC TGGCGGGCGG CATCCCCTCT
GATGCCCTGT TTGATTTCGA AGGCTTGAGC ATCGCTACTC ATCAGGCGAT CACCGAGCAG
CCGAAAAGCG CTTTCCAATA TGGTTTGACC GAAGGCAGTC CGGTGCTGCG TGAGCGCATC
TGCGAACTGT GCGCCCAGCG TGGTGTTTCT GCCACTGCCG AAGAAGTGAT GGTCACGGCC
GGTTCCCAGC AGGCGCTGGA TCTGGTGATG CGTGCCATCG TCAACCCGGG CGACGTGTTT
GTGGTGGAGC GTCCGACCTA TCTGGCGGCG TTACAGACGC TGGAGCTGGC GGAAGCCAAC
ATCATGTCGG TGTCGTCCGA CAGCGATGGC ATGGTGGTCG AAGAGCTGGC CGAACTGCTG
AAAACCCAGC GCATCAAGGG CGTGTATGTG GTGCCGAACT TCGGCAACCC AAGCGGTATC
ACCCTGAGCG CACCGCGCCG CGAACTGTTG GTGAAACTGG CGGCCGAGCA CAATTTCCTG
ATCATCGAGG ATGACCCGTA CGGCGAACTG CGCTTTACCG AAGAGCGCAA CGCCACGCTG
CACCAGATTT CCCAGCAGGT GCTGGGTCAC ACCGATAACA TTATCTACAC CTCGACCTTC
TCCAAGATCC TGGCACCGGG CCTGCGCCTG GGCTGGGCGA TTTTGCCTGA GTTCCTGCTG
CATAAAGTGG CGATCATCAA GCAGGCTGCG GATCTGCATG CCAGCGCGCT GTCGCAGAGC
ATCGTCGAAT GCTATCTGGG GCTGGATCGT CTGCCGGCGC AGATCGAAAA GATCCGCGCG
GCCTACAAGC ACAAGGGTGA GATCCTGGCC GGGCTGGTGG AGCAAGAGCT GGGCGATCAC
ATCAGCTTCG ATATGCCGAA GGGCGGTATG TTCCTGTGGG CGCGTTTCCG CCAGCCGTTT
AACGCTACCG AATGGCTGAA AACCACCCTG CAGCAGGGCG TGGTATTCGT GCCGGGGGAA
TACTTCTTCT CAGACAACCC GGATCGTTCG ACCTTCCGCC TGTCGTTCGC CACCGCGACC
GAACAGCAAA TGCAGGAAGC GGTCGCTCGA CTGCGTCGTT CGCTGTAA
 
Protein sequence
MNREGLLAQR IVKVKSSAIR ELLKHSKMEN VISLAGGIPS DALFDFEGLS IATHQAITEQ 
PKSAFQYGLT EGSPVLRERI CELCAQRGVS ATAEEVMVTA GSQQALDLVM RAIVNPGDVF
VVERPTYLAA LQTLELAEAN IMSVSSDSDG MVVEELAELL KTQRIKGVYV VPNFGNPSGI
TLSAPRRELL VKLAAEHNFL IIEDDPYGEL RFTEERNATL HQISQQVLGH TDNIIYTSTF
SKILAPGLRL GWAILPEFLL HKVAIIKQAA DLHASALSQS IVECYLGLDR LPAQIEKIRA
AYKHKGEILA GLVEQELGDH ISFDMPKGGM FLWARFRQPF NATEWLKTTL QQGVVFVPGE
YFFSDNPDRS TFRLSFATAT EQQMQEAVAR LRRSL