Gene Spro_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0194 
Symbol 
ID5605622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp218796 
End bp219422 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID640935685 
Productthreonine efflux system 
Protein accessionYP_001476432 
Protein GI157368443 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.331917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.247253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATGC TGTTTCTGAC CGTGGCGCTG GTGCACCTGA TTGCGCTGAT GAGCCCGGGG 
CCGGACTTCT TTTTTGTTTC GCAAACCGCC GCCAGCCGCT CGCGCCGTGA GGCGATGATG
GGCGTGCTGG GCATTTCACT GGGTATCGTA GTGTGGGCGG GCGTAGCCTT GATGGGCCTG
CATCTGATCC TGCAAAAAAT GGCCTGGCTG CACCAAATTA TCATGGTTGG CGGTGGGATT
TACCTGTGCT GGATGGGCTG GCAACTGTTG CGCTCCGCCC GTTCTCAAAA TGCCCAGTCG
GTGCCTGCGG CGGAGATGAA AGTGGCCTTG CCGAAGCCGG GGCGCAGCTT TATCCGCGGT
TTTCTGACCA ACCTGTCCAA CCCGAAGGCG GTTATCTATT TCGGCAGCGT GTTTTCACTG
TTTGTGGGTG ACGACGTCGG GGCCGGTGCA CGCTGGGGCT TGTTCTTGCT GATCATCGCC
GAGACTTTTG TCTGGTTCAG CCTGGTGGCG GTGGTGTTTG CATTGCCGAC CATGCGCCGG
GGTTATCAAC GGCTGGCCAA GTGGATAGAC GGACTGGCGG GCGTGCTGTT TACCGGTTTT
GGTTTACACC TGATCTTTAC CCGCTAA
 
Protein sequence
MLMLFLTVAL VHLIALMSPG PDFFFVSQTA ASRSRREAMM GVLGISLGIV VWAGVALMGL 
HLILQKMAWL HQIIMVGGGI YLCWMGWQLL RSARSQNAQS VPAAEMKVAL PKPGRSFIRG
FLTNLSNPKA VIYFGSVFSL FVGDDVGAGA RWGLFLLIIA ETFVWFSLVA VVFALPTMRR
GYQRLAKWID GLAGVLFTGF GLHLIFTR