Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0193 |
Symbol | |
ID | 5605585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 216939 |
End bp | 218783 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640935684 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001476431 |
Protein GI | 157368442 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.486098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.649708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGAAGT GTGTGTCAAC CGCAGCAGTG ATAAACAAAG AGTTGCTGGC CGAGCAGGTA TTACGCGATA CCTTCGGCTA CCAGCAATTC CGACCGGGTC AACAAACGAT TATCAACACG GCGATCGGCG GGCAGGATTG CCTGGTGGTC ATGCCGACCG GTGGCGGTAA ATCGTTGTGT TACCAAATCC CGGCGCTGGT GATGGATGGC CTGACGTTAG TGGTTTCCCC GTTGATCTCG CTGATGAAAG ATCAGGTTGA TCAGTTACTG GCCTATGGCG TCGCCGCTGC CTGCTATAAC TCAACGCAGA CGCGTGAGCA GCAGCTCGAG GTGATGGCGG GTTGCCGCAG CGGCCAGATC AAAATGCTGT ATATCGCCCC CGAGCGGCTG ATGATGGACA GTTTCCTCGA TCAGCTCGGC GGCAACCCAC CTGCCTTACT GGCGGTGGAT GAAGCGCACT GTATTTCGCA GTGGGGTCAT GATTTCCGGC CTGAATACCG TGCATTGGGG CTGTTGAAGC AACGCTTCCC TGATATGCCG GTGATTGCGT TGACCGCGAC CGCCGACGAA TCCACCCGTG GTGACATAGT TCGCCTGCTG GCATTGCAGG ATCCGCTGGT GCAGGTCAGC AGTTTTGACC GGCCAAACAT CCGCTATACG CTGGTGGAGA AATTCAAGCC GCTCGACCAA TTGTGGCGCT TCGTGCAGGA CCAACGTGGC AAAAGCGGCA TCATTTACTG CAACAGCCGC GCCAAGGTCG AAGACACCAC TGCCCGCCTG CAAAGCCGTG GGCTGAGCGT GGGAGCCTAT CATGCCGGGT TGGACAACGA CCGCCGCGCG CAGGTGCAGG AAGCGTTCCA GCGCGACGAT TTGCAGGTAG TGGTCGCCAC CGTCGCCTTT GGCATGGGCA TTAACAAACC CAACGTGCGC TTTGTGGTGC ACTTTGATAT TCCGCGCAAT ATCGAATCTT ATTATCAGGA AACCGGCCGT GCCGGGCGTG ACGGCTTACC GGCCGAGGCG ATCCTGCTGT ATGACCCGGC CGATATGGCC TGGCTGCGCC GCTGTCTGGA GGAAAAGCCC GCCGGACAGC AACTGGATAT CGAGCGCCAC AAGTTGAACG CCATGGGGGC TTTCGCCGAA GCGCAGACCT GCCGCCGCTT GGTGCTGCTC AACTATTTTG GCGAAGGTAA ACACCAGAAC TGCGGCAACT GCGATATCTG CCTGGATCCT CCCAAGCGTT ACGATGGGCT GGAAGATGCG CGCAAGGCGT TGTCCTGTGT GTATCGCGTC GGCCAGCGTT TCGGGCTGGG ATACATTGTC GAGGTACTGC GCGGTTCCAA TAACCAGCGT ATCCGCGAAT ACGGACATGA GAAACTGCCG GTGTACGGCA TTGGTCGCGA GCAGACCACC GAACACTGGA CCAGCGTGCT GCGTCAGTTG ATCCACCTGG GCTTTATCAC CCAGAACATT GCCATGCACT CGGCGCTGCA ACTGACCGAG GCCGCGCGCC CGGTGCTGCG GGGTGAGCTG GAACTGCAAT TGGCGGTACC GCGCATCCAG AGCCTGAAGG CCCGCAGCAG CAGTAACCAA AAGTCCTACG GCGGCAATTA CGATCGCAAA CTGTTTGCCA AATTGCGCAA GTTGCGAAAA TCGATTGCCG ACGAAGAAAA TATCCCGCCT TATGTGGTGT TTAACGATGC CACCTTGTTG GAAATGGCGG AGCAGATGCC TATCAAGGCC GGCGACCTGT TAAGCGTTAA CGGTGTCGGT CAGCGCAAGC TGGAGCGTTT TGGCGCGCCG TTTATGGCGA TGATCCGCGA TCACCTCGAT AATGACGAAG ATTAA
|
Protein sequence | MGKCVSTAAV INKELLAEQV LRDTFGYQQF RPGQQTIINT AIGGQDCLVV MPTGGGKSLC YQIPALVMDG LTLVVSPLIS LMKDQVDQLL AYGVAAACYN STQTREQQLE VMAGCRSGQI KMLYIAPERL MMDSFLDQLG GNPPALLAVD EAHCISQWGH DFRPEYRALG LLKQRFPDMP VIALTATADE STRGDIVRLL ALQDPLVQVS SFDRPNIRYT LVEKFKPLDQ LWRFVQDQRG KSGIIYCNSR AKVEDTTARL QSRGLSVGAY HAGLDNDRRA QVQEAFQRDD LQVVVATVAF GMGINKPNVR FVVHFDIPRN IESYYQETGR AGRDGLPAEA ILLYDPADMA WLRRCLEEKP AGQQLDIERH KLNAMGAFAE AQTCRRLVLL NYFGEGKHQN CGNCDICLDP PKRYDGLEDA RKALSCVYRV GQRFGLGYIV EVLRGSNNQR IREYGHEKLP VYGIGREQTT EHWTSVLRQL IHLGFITQNI AMHSALQLTE AARPVLRGEL ELQLAVPRIQ SLKARSSSNQ KSYGGNYDRK LFAKLRKLRK SIADEENIPP YVVFNDATLL EMAEQMPIKA GDLLSVNGVG QRKLERFGAP FMAMIRDHLD NDED
|
| |