| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0184 |
|---|
| Symbol | xerC |
|---|
| ID | 5605442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 207437 |
|---|
| End bp | 208348 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640935675 |
|---|
| Product | site-specific tyrosine recombinase XerC |
|---|
| Protein accession | YP_001476422 |
|---|
| Protein GI | 157368433 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4973] Site-specific recombinase XerC |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.72736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGC TGGCGGCCAG CCTGCAACAG CCGGTGGACG CTTTTTTGCG CTATCTGAAG
GTCGAGCGCC AGCTCAGCCC GCTCACCCAA CTGAGTTATT CGCGTCAACT GCAGGCGCTG
ATGGCGCTGG CGCAGGAAAT TGGCGTCACG GAGTGGCCGT TGCTGGACGC CGCCAAAGTC
CGTCAGCTTG CGGCGCGCAG TAAACGTGCC GGATTACAGT CTTCCAGCCT CGCGCTGCGC
CTGTCGGCGT TGCGCAGTTT TCTCGACTGG CAGGTCAGCC AGGGTATGCT GATTGCCAAC
CCGGCCAAAG GGATCCGAAC GCCACGCAGC GGCCGTCATC TGCCGAAAAA CATAGACGTT
GATGAAATGA ATCAGCTGCT GAATATCGAT CTTAACGATC CTTTGGCGGT GCGCGATCGC
GCCATGCTTG AAGTCATGTA CGGTGCCGGG CTGCGTCTTT CGGAACTGGT GGGGCTGGAC
TGTCGCCATG TCGATCTGGC CGCCGGTGAA ATCTGGGTGT TGGGTAAGGG CAGCAAGGAA
CGCAAACTGC CGGTGGGCCG CACTGCGGTG ACCTGGCTTG AACACTGGCT GGCGATGCGC
GATCTGTTCG GGCCGTCAGA CGACGCGATG TTCCTGTCCA ACCAGGGCAA GCGCATCTCG
ACCCGCAACG TGCAAAAGCG TTTTGCCGAG TGGGGCGTCA AACAGGGCGT TAACAGCCAT
ATCCATCCGC ACAAGCTGCG CCACTCGTTT GCCACCCATA TGCTGGAGTC GAGCGGCGAT
CTGCGTGCGG TGCAGGAACT GCTCGGCCAC GCCAATCTGA CCACCACTCA AATCTACACC
CACCTCGACT TTCAACATCT GGCGAACGTG TACGATGCTG CGCATCCACG CGCCAAACGG
GGGAAATCCT GA
|
|---|
| Protein sequence | MIPLAASLQQ PVDAFLRYLK VERQLSPLTQ LSYSRQLQAL MALAQEIGVT EWPLLDAAKV
RQLAARSKRA GLQSSSLALR LSALRSFLDW QVSQGMLIAN PAKGIRTPRS GRHLPKNIDV
DEMNQLLNID LNDPLAVRDR AMLEVMYGAG LRLSELVGLD CRHVDLAAGE IWVLGKGSKE
RKLPVGRTAV TWLEHWLAMR DLFGPSDDAM FLSNQGKRIS TRNVQKRFAE WGVKQGVNSH
IHPHKLRHSF ATHMLESSGD LRAVQELLGH ANLTTTQIYT HLDFQHLANV YDAAHPRAKR
GKS
|
|---|
| |