Gene Spro_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0165 
Symbol 
ID5605233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp186792 
End bp187859 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content56% 
IMG OID640935652 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_001476403 
Protein GI157368414 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.183737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACGTA TTTTAGTCAC TGGAGGCGCC GGCTTTATTG GCTCCGCAGT CGTGAGGCAT 
ATTATCGAAG CCACGCAGGA CAGTGTCCTG GTGCTGGATA AGCTCACCTA CGCGGGCAAT
CTGGAGTCGC TTTCGGTGGT TGCCGATAAT CCTCGTTATT CGTTTGAACA GGTGGATATC
TGCGATCGCG CGGCGTTGGA TCGGGTGTTT GCCGAGTACC AGCCGGACGT GATCATGCAT
CTGGCGGCAG AAAGCCACGT TGACCGTTCT ATCGACGGCC CGGCGGCATT TATTGAAACC
AACGTGGTGG GCACCTACAC CATGCTGGAG GCGGCCCGCC ATTATTGGCA GCCGCTGGAC
GCGGCAAAGA AGCAAAGCTT CCGTTTCCAC CACATTTCCA CCGACGAAGT GTATGGTGAT
CTGCACGGTA CGGACGATCT GTTTACCGAA ACCACGCCTT ACTCGCCAAG CAGCCCGTAT
TCGGCCTCGA AGGCCTCCAG CGATCACCTG GTCCGCGCCT GGCTGCGTAC TTATGGCCTG
CCGACTCTGG TCACCAACTG TTCCAATAAC TACGGTCCCT ATCACTTCCC GGAGAAACTG
ATCCCGTTGG TGATCCTCAA TGCCGTTGCC GGTAAACCCT TGCCGGTGTA TGGCGATGGG
GCGCAGGTGC GTGATTGGCT GTATGTCGAA GACCACGCTC GCGCGCTGTA CCAGGTGGTT
ACCGAAGGCG TGGTAGGGGA AACCTACAAT ATTGGCGGCC ACAATGAGCG CAAGAATATT
GAAGTGGTGC AGACCATCTG CGACCTGCTT GAAGAGTTGG CGCCGAACAA ACCACAGGGC
GTGGAGAAAT ACCGCGACCT GATTACCTAC GTCAAGGATC GTCCGGGCCA TGATATGCGC
TACGCGATCG ATGCCGGAAA GATTGACAGG GAGCTGGGCT GGCGGCCGCA GGAAACCTTT
GAAAGCGGCA TCCGCAAAAC GGTTTCCTGG TATCTGAACA ATGAAATCTG GTGGCGTCGC
GTTCAGGACG GTTCCTATGC GGGTGAACGA TTAGGTTTAT CCGACTAA
 
Protein sequence
MKRILVTGGA GFIGSAVVRH IIEATQDSVL VLDKLTYAGN LESLSVVADN PRYSFEQVDI 
CDRAALDRVF AEYQPDVIMH LAAESHVDRS IDGPAAFIET NVVGTYTMLE AARHYWQPLD
AAKKQSFRFH HISTDEVYGD LHGTDDLFTE TTPYSPSSPY SASKASSDHL VRAWLRTYGL
PTLVTNCSNN YGPYHFPEKL IPLVILNAVA GKPLPVYGDG AQVRDWLYVE DHARALYQVV
TEGVVGETYN IGGHNERKNI EVVQTICDLL EELAPNKPQG VEKYRDLITY VKDRPGHDMR
YAIDAGKIDR ELGWRPQETF ESGIRKTVSW YLNNEIWWRR VQDGSYAGER LGLSD