Gene Spro_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0162 
Symbol 
ID5605188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp183269 
End bp184321 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content56% 
IMG OID640935649 
Productlipopolysaccharide biosynthesis protein WzzE 
Protein accessionYP_001476400 
Protein GI157368411 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3765] Chain length determinant protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAG AAACAAGGTC TGACAAGAAT ATCCCGGCGG TGGATAACGA ACTCGATATC 
CGCGGCCTGT GCTGCACCCT GTGGCGTGGT AAGCCATGGA TTATCGGTAT TGCGGTGTTA
TTCGCCGTGG TAGCGCTGAT GGTTTCCTAC CTGGTGAAAC AGGAGTGGAG TGCGACGGCG
ATTACCGATC GGCCAACAGT GAATGCGTTG GGGGGATATT ATTCCCAGCA ACAATTCCTG
CGTAATCTGG ACGTGCGGAC CATGCCGGCC GCCAGCACCG ATCAACCCGG CATTGCTGAC
GAAGCCTATA ATGAATTCAT TATGCAGTTG GCGGCCTACG ATACGCGTCG CGATTTCTGG
CTGCAGAGCG ATTATTACAA GCAGCGCCAG GAAGGCGATG CAGCTGCCGA TGCGGCATTG
CTCGACGAAC TGATTAACAA TATTCAGTTC ACACCGCGTG ATGATAAAAA AGTGCCGAAC
GACGGCGTGA AGCTGACGGC GGAAACGGCG GCGGATGCCA ACCGTCTGTT GCGTCAATAT
GTGGCGTTCG CCAGTCACCG CGCTGCGCAG CATTTGAACG AAGAGATCCA GGGTGCCTGG
GCGGCCCGTA CCACCTCGAT GAAGGCGCAG GTCAAGCGTC AGGAAGCGGT GGCGGCGGCA
GTGTATAAGC GTGAATTGAA TACCATTCAA CAGGCACTGA AGATTGCCGA GACGCAGGGT
ATCAGCCGGA CTCAGACCGA TACGCCGACA GAGCAACTGC CGGACTCCGA CCTGTTCCTG
CTGGGTAAAC CTATGCTGCA GGCGCGTTTG GAAGGGCTAC AGGCTTCAGG GCCAACCTTC
GATCTCGATT ACGATCAAAA TCGTGCGATG CTGTCGACAT TAAACGTCGG CCCGACGTTG
GACGAGAAGT TTCAGACTTA CCGCTATTTG CGGACCCCGG AAGAACCGGT AAAACGTGAT
AGCCCACGGC GGATATTCTG GTTGATCATG TGGGGCGCGA TGGGTGCTTT GGTTGGCGCA
GGTGTTGCCC TGGTGCGTCG GCCGCGTAAT TAA
 
Protein sequence
MNPETRSDKN IPAVDNELDI RGLCCTLWRG KPWIIGIAVL FAVVALMVSY LVKQEWSATA 
ITDRPTVNAL GGYYSQQQFL RNLDVRTMPA ASTDQPGIAD EAYNEFIMQL AAYDTRRDFW
LQSDYYKQRQ EGDAAADAAL LDELINNIQF TPRDDKKVPN DGVKLTAETA ADANRLLRQY
VAFASHRAAQ HLNEEIQGAW AARTTSMKAQ VKRQEAVAAA VYKRELNTIQ QALKIAETQG
ISRTQTDTPT EQLPDSDLFL LGKPMLQARL EGLQASGPTF DLDYDQNRAM LSTLNVGPTL
DEKFQTYRYL RTPEEPVKRD SPRRIFWLIM WGAMGALVGA GVALVRRPRN