Gene Spro_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0158 
Symbol 
ID5605160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp178269 
End bp179555 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content56% 
IMG OID640935645 
ProductATP-dependent RNA helicase RhlB 
Protein accessionYP_001476396 
Protein GI157368407 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.495687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA CACACTTGAC CGAACAGAAG TTTTCCGACT TCGCCCTGCA CCCGTTAGTC 
CTTGAAGCCC TTGAAAAGAA AGGGTTTCAA CATTGCACGC CTATCCAGGC GTTAGCATTG
CCGCTCACGC TCTCTGGGCG TGACGTTGCA GGTCAGGCGC AAACCGGTAC CGGAAAGACG
TTGGCATTTT TAACGTCTAC TTTTCACTAT TTGCTTTCTC ACCCGGCGAA ACAGGATCGC
AAGATCAACC AGCCGCGCGC CTTGATCATG GCACCAACGC GTGAACTCGC GGTGCAGATC
CACTCCGATG CGGAAGCCCT GTCCCAGTCC ACAGGCCTGA AAATGGGTCT GGCATACGGC
GGCGATGGCT ACGACAAACA GCTGAAAGTG CTGGAAAGCG GCGTGGATAT CCTGGTGGGA
ACTACCGGTC GTTTAATTGA TTACGCCAAA CAGAACTATA TCGATCTGGG CGCGATCCAG
GTTGTGGTGC TGGATGAAGC CGACCGCATG TACGATCTGG GCTTTATCAA AGACATTCGC
TGGTTGTTCC GCCGCATGCC TGCGGTCGAT CAACGCCTGA ACATGCTGTT CTCTGCCACC
CTTTCCTATC GCGTACGCGA GCTGGCTTTC GAGCAGATGA ACAACGCTGA ATATGTTGAA
GTGGAACCGG AACAGAAAAC CGGCCACCGC ATTAAAGAAG AATTGTTCTA CCCGTCCAAC
GAAGAAAAAA TGCGTCTGCT GCAGACGTTG ATCGAAGAAG AGTGGCCTGA CCGCTGCATC
ATCTTCGCCA ACACCAAGCA CCGCTGTGAA GACGTTTGGG GCCATCTGGC TGCCGATGGT
CACCGCGTAG GCCTGTTGAC CGGCGATGTG GCGCAGAAAA AACGCCTGCG TATTCTCGAT
GACTTCACCA AGGGCAACCT CGATATTCTG GTCGCTACCG ACGTCGCTGC CCGCGGCCTG
CATATTCCGT TGGTTACCCA CGTCTTCAAC TACGACTTGC CTGACGACTG CGAAGACTAC
GTTCACCGTA TCGGTCGTAC CGGCCGTGCC GGCGAAAGCG GTCACTCCAT CAGCCTGGCT
TGCGAAGAGT ACGCGCTCAA CCTGCCGGCG ATCGAAACCT ATACCGGTCA CAGCATTCCG
GTGAGCAAGT ACAACAGTGA TGCGTTATTG AGTGATCTGC CTGCGCCGAA ACGCCTGGCA
CGTCCTCGCG GCGGCAACGG CCCACGCCGT AACTCCGCGC CACGTCGTGG CGGTGCGCCA
CGCAATAACC GTAAACGTTC AGGCTGA
 
Protein sequence
MSKTHLTEQK FSDFALHPLV LEALEKKGFQ HCTPIQALAL PLTLSGRDVA GQAQTGTGKT 
LAFLTSTFHY LLSHPAKQDR KINQPRALIM APTRELAVQI HSDAEALSQS TGLKMGLAYG
GDGYDKQLKV LESGVDILVG TTGRLIDYAK QNYIDLGAIQ VVVLDEADRM YDLGFIKDIR
WLFRRMPAVD QRLNMLFSAT LSYRVRELAF EQMNNAEYVE VEPEQKTGHR IKEELFYPSN
EEKMRLLQTL IEEEWPDRCI IFANTKHRCE DVWGHLAADG HRVGLLTGDV AQKKRLRILD
DFTKGNLDIL VATDVAARGL HIPLVTHVFN YDLPDDCEDY VHRIGRTGRA GESGHSISLA
CEEYALNLPA IETYTGHSIP VSKYNSDALL SDLPAPKRLA RPRGGNGPRR NSAPRRGGAP
RNNRKRSG