| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0156 |
|---|
| Symbol | |
|---|
| ID | 5605155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 174559 |
|---|
| End bp | 176583 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640935643 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_001476394 |
|---|
| Protein GI | 157368405 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.156092 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTAA ATCCCAGCCA ACAACAAGCC GTCGAATTCG TTACCGGGCC CTGTCTGGTG
CTGGCCGGTG CCGGTTCCGG CAAGACGCGC GTCATCACCA ACAAAATCGC TCACCTGATC
CACAACTGTG GTTATCAGGC GCGGCACATC GCCGCCGTGA CCTTTACCAA TAAGGCGGCG
CGTGAGATGA AAGAGCGTGT GGCGCAAACC ATGGGGCGCA AAGAAGCACG CGGACTGATG
ATTTCCACTT TCCACACGCT GGGGCTGGAA ATCATCAAAC GTGAATATGT CGCGCTGGGG
ATGAAGTCCA ACTTCTCACT TTTCGACGAT CAGGATCAGC TGGCGCTGTT GAAAGAACTG
ACCGAGAAAT GGCTGGAGAA TGACAAGACG CTGGTAGCGC AGCTGATTTC CACCATCTCC
AACTGGAAGA ATGATCTGGT CGATCCCCAG AAGGCGATGG AACTGGCGCG CTCTGAACGC
GACAAGCTGT TCGCGCATTG CTACGGCCTG TATCATGCAC ATATGCGTGC CTGTAACGTG
CTGGATTTTG ACGATTTAAT CCTGCTGCCG ACTCTGCTGC TGCAGCGCAA TGAAGAAGTG
CGCGAACGCT GGCAGAACCG TATTCGTTAT CTGTTGGTGG ATGAATATCA GGACACCAAC
ACCAGTCAGT ACGAACTGGT GAAGTTGCTG GTGGGTAATC GCGCACGTTT CACCGTGGTG
GGTGACGACG ATCAGTCGAT TTACTCCTGG CGTGGTGCGC GTCCACAGAA CCTGGTGCTG
TTGAAGGAAG ACTTCCCGGC TCTGCAGGTG ATTAAGCTGG AGCAGAACTA CCGCTCCAGC
GAGCGTATCC TGAAGGCGGC GAATATCCTG ATCGCCAATA ACCCGCACGT GTTTGAAAAA
CGGCTGTTTT CCGAGCTGGG TTACGGCGAA GAGCTGAAGG TGGTGACCGC CAATAATGAG
GATCATGAGG CCGAGCGCGT CGTGGGTGAG CTGATTGCTC ATCACTTCGT GAAGAAAACC
AACTACGGCG ATTATGCGAT CCTTTATCGT GGTAACCATC AGTCACGGCT GTTTGAAAAA
ATGCTGATGC AAAACCGCAT CCCTTACAAA ATTTCCGGTG GCACCTCGTT TTTCTCGCGG
CCGGAAATCA AGGATCTGCT GGCCTACCTG CGTGTTCTGA CTAACCAGGA TGATGACAGC
GCATTTCTGC GCATCGTTAA CACGCCAAAG CGCGAGATTG GCCCGGCAAC GCTGCAAAAA
CTGGGTGAGT GGGCTAATCA ACGTAACAAA AGCCTGTTCC GCGCCAGTTT CGATCTCGGC
CTGAGTCAGC ACCTGACCGG TCGTGGGTTA GAGTCGCTGC AACGCTTCAC TCACTGGCTG
GACGGGATTG CTCAGTTGGC GGAGCGTGAA CCGATAGCCG CGGTGCGCGA TCTGATCCGC
GGCGTAGATT ACGAAAGTTG GCTGTTTGAA ACTTCACCCA GCCCGAAAGC CGCCGAAATG
CGCATGAAAA ACGTCAATAC CCTGTTCGGC TGGATGACGG AAATGCTCGA AGGCAGCGAG
CTGGACGAGC CAATGACGCT GACCCAGGTG GTAACGCGCT TTACCCTGCG CGACATGATG
GAACGCGGCG AAAGCGACGA GGAACTGGAT CAGGTTCAGT TGATGACGCT GCATGCTTCC
AAAGGGCTGG AGTTCCCCTA TGTCTTCCTG GTGGGGATGG AGGAGGGGTT ACTGCCGCAT
CAGAGCAGCA TTGACGAGGA TAACGTCGAT GAAGAGCGGC GTTTGGCCTA TGTAGGGATC
ACTCGCGCCC AAAAAGAGCT GATTTTCACC CTGTGTCGCG AACGTCGCCA ATATGGCGAA
CTGGTGCGGC CGGAACCCAG TCGTTTCTTG CTGGAGCTGC CGCAGGATGA CCTGGCGTGG
GAAAGTGAAC GTAAGGTGGT CAGTCCGCAA GAACGGATGC AAAAAGGGCA GAGCCATCTG
GCGAATATTC GCGCCCAGTT GGCCAAGGCT AAAGGCGGAA GTTAA
|
|---|
| Protein sequence | MRLNPSQQQA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI HNCGYQARHI AAVTFTNKAA
REMKERVAQT MGRKEARGLM ISTFHTLGLE IIKREYVALG MKSNFSLFDD QDQLALLKEL
TEKWLENDKT LVAQLISTIS NWKNDLVDPQ KAMELARSER DKLFAHCYGL YHAHMRACNV
LDFDDLILLP TLLLQRNEEV RERWQNRIRY LLVDEYQDTN TSQYELVKLL VGNRARFTVV
GDDDQSIYSW RGARPQNLVL LKEDFPALQV IKLEQNYRSS ERILKAANIL IANNPHVFEK
RLFSELGYGE ELKVVTANNE DHEAERVVGE LIAHHFVKKT NYGDYAILYR GNHQSRLFEK
MLMQNRIPYK ISGGTSFFSR PEIKDLLAYL RVLTNQDDDS AFLRIVNTPK REIGPATLQK
LGEWANQRNK SLFRASFDLG LSQHLTGRGL ESLQRFTHWL DGIAQLAERE PIAAVRDLIR
GVDYESWLFE TSPSPKAAEM RMKNVNTLFG WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM
ERGESDEELD QVQLMTLHAS KGLEFPYVFL VGMEEGLLPH QSSIDEDNVD EERRLAYVGI
TRAQKELIFT LCRERRQYGE LVRPEPSRFL LELPQDDLAW ESERKVVSPQ ERMQKGQSHL
ANIRAQLAKA KGGS
|
|---|
| |