Gene Spro_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0125 
Symbol 
ID5606633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp134688 
End bp135437 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content58% 
IMG OID640935611 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001476363 
Protein GI157368374 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.826722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTGC GTACTGAATT TGGACGAATT CTGATTACCG GCGCGGGCGG CCGGGTGGCG 
ACGGCATTCC GTCAATCGGT GGGAAATCGC TATCAACTGC GGCTGGCGGA AAAAGACCTC
GGGCTGCTGA CCAACCTACA GCCGAATGAT GAGATCATCA GCTTCGACAT TGCCGACATC
GCCGCCTGCC GCGCGGCCTG CGCCGGCATC GATACCGTGT TGCATCTGGC GGCCGATCCT
TCTCCTGACG CCGACTTCTG CAATTCATTG ATGGATAACA ACATCCTCGG CACCTTCAAT
ATTTTCCGCG CAGCGAAGGA CGCCGGTTGC AAACGCGTGG TCTTCGCCAG CAGCGCGCAG
GCGGTGGAAG GTTATGCGTT GGACTACCAA ATTCGGCCGC AGGACGCGCC CAAACCGAAA
AATCTTTATG GTGTCAGCAA GGCATTCGGC GAAGGCATTG CCGCCTATTT TGCCCATCAG
GAAGGACTTT CCGCATTGTC GGTGCGCATC GCCAACTTCA CCACGCTGGA ACCAGGCGAG
CAGCTCAGCG CTCGTGATAT GAGCGCTTTT CTCAGCCACC GCGACGCCGC CGATCTGCTG
GAACGTTGCC TGCGCATTGA AGGCGTACAC CATGCGGTGG TGCACGGCGT TTCCAACAAC
CGCTATAAGC GGCTGTCGCT GGAGGAAACC AGCCAACTGC TGGGTTACTA CCCACAGGAC
GACGCGTTTA GCATCCTCGG TTTCGGCTAA
 
Protein sequence
MTLRTEFGRI LITGAGGRVA TAFRQSVGNR YQLRLAEKDL GLLTNLQPND EIISFDIADI 
AACRAACAGI DTVLHLAADP SPDADFCNSL MDNNILGTFN IFRAAKDAGC KRVVFASSAQ
AVEGYALDYQ IRPQDAPKPK NLYGVSKAFG EGIAAYFAHQ EGLSALSVRI ANFTTLEPGE
QLSARDMSAF LSHRDAADLL ERCLRIEGVH HAVVHGVSNN RYKRLSLEET SQLLGYYPQD
DAFSILGFG