| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0122 |
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| Symbol | |
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| ID | 5603031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 130011 |
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| End bp | 131882 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640935608 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001476360 |
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| Protein GI | 157368371 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTC CTGTAACCCT TGAAATGAGC GTAAAAAAAG TGGCCATCCT GACGCAGTTA
AGCCGCGGTC TGACCCGCTT TACCGCCTGG GGTGGAGCAC TGGCGCTGCT GATCAACGTG
GTGGTGGTAT TCGCCTCGGT GATTTGGCGC TACGCGCTGC ACAGCCCGAT TGAATGGGCG
GAAGAAGTGG CGCGCGCGCT GATGGTAACG CTGGTGTTCT TCGGCGTCGC CACCTCCACC
GGGCGTGGCC GACACATCGG CGTCGATCTG TTCCTGCGCT GGCTGCCCGC GGTAGCCCGG
CCCTACGTGG TGCATGCCAG CCGTTGGGTG CTGGTACTGG TGGCGCTGGG CCTGACGGTG
TCCAGCTTCA GCCTGGTGGG TATTTCACTG CCACAGACCA CCGAACACGG CCTGCCACAG
GCGATCTTCG TGGTTCCGGT GTTCATCGGC GCGGCAGTGA TGCTGGTCAG CGCGCTCGAT
CACGCCTGCC AGGCACCGTT GAAAGTGGTG TTAATCAGCG CCGCCGCCGT CGCTCTTCTG
GGCGGCGCTG GCTACCTCAG CCTGCATGCC CCGCTGGGGT TCAGCTCGCT GCCCGCCGCG
CTGATGCTGG CCTGCTTTAT CCTGGGCATC ATCTCCGGCG TGCCAATCGC CTTTACCCTG
GGCATGTCGG CTATGGTGTT CTTTCTTAGC GATCCATCGC TGCCATTCGT GTTCTTTGCC
CAGCAGGTGA CCGCCGGCGT CGATCATTTT GTGCTGCTGG CCATTCCGTT CTTTCTGCTG
GCTGGTGCGG TGATGGAGGT CAACGGCATG TCGTCACGGC TGGTTGAGCT GATCGTGCGC
GGCATGGGGC GTTATCGCGG TGGCCTGAAT ATGACCACGA TTGTATCGAT GGCCTTCTTC
TCGGGTATTT CCGGCTCCAA ACTGGCAGAC GTCGCCACGG TCGGCGGCGT GCTGATGCCC
GCGGTACGCC GGGCACGCCA ACCGGCCGCA GAGTCTGCCG GGGTGTTCGC CGCCTCGGCG
ATCATGGCGG AAACCATCCC CCCCTGCGTC AATCTGATCG TGATGGGCTT TATTGCCAAT
ATTTCGATTG GCGCACTGTT TATCGCCGGC CTGATCCCAG CGCTGTGCCT GCTGGTGTTG
CTGCTGATTG CCGCCGTGAT CTTCGGCAAG CGCATCAACG TCGATGACGC CTACCCGGTG
CGAATGCCAA CCCGCCAACT GCTGATCGGT GCCGCCGTCG GGCTGGTGAT GATTTTGATG
ATCGGCAAGG GCGTGGTGGC CGGTATCGCC ACCTCCACCG AGATTTCCGC CTTTGCCGTG
GTTTACGCCA TCGTGGTCGG TCGGCTGGCC TTTGGGGAAC TGACCCTGAA AGCCACGGTG
AAGTTGTTCG TCGACACCGC AGCGCTGTCC GGCATGCTGT TGTTTATCGT CGCCTGCGCC
ACCAGTTTGT CCTTCGCTCT GACCATCGAG ATGATCCCGC AGCAGTGCGC GCAACTGTTG
GTCGCCATCG GCGCGGACTA CGGCCCGTGG CTGTTTCTGC TGCTGTCGAT TGTCATCCTG
ATTATTTTCG GCGCGGTGCT GGAGGGGGCT CCGGCGCTGA TTATCTTTGC CCCCATCCTG
GTCCCTATCG CCACCCAGCT CGGCTTCAAC CCGCTGCACT ACGCCATTGT GATGATTCTG
GCGATGGGCT TCGGCCTGTT TTCCCCGCCG ATCGGCCTGG GCCTGTACAC CACCTGCGCC
ATTTGCGGCG TACCGATGCA GGACGTGATT AAACCTATGG CCAAGTACCT GCTGATCATC
CTGCTCGGCA TCATTGTTAT CGCGCTGTTC CCGGCGCTCA CCACCTGGCT GCCCACGCGG
CTGGGCTACT GA
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| Protein sequence | MTLPVTLEMS VKKVAILTQL SRGLTRFTAW GGALALLINV VVVFASVIWR YALHSPIEWA
EEVARALMVT LVFFGVATST GRGRHIGVDL FLRWLPAVAR PYVVHASRWV LVLVALGLTV
SSFSLVGISL PQTTEHGLPQ AIFVVPVFIG AAVMLVSALD HACQAPLKVV LISAAAVALL
GGAGYLSLHA PLGFSSLPAA LMLACFILGI ISGVPIAFTL GMSAMVFFLS DPSLPFVFFA
QQVTAGVDHF VLLAIPFFLL AGAVMEVNGM SSRLVELIVR GMGRYRGGLN MTTIVSMAFF
SGISGSKLAD VATVGGVLMP AVRRARQPAA ESAGVFAASA IMAETIPPCV NLIVMGFIAN
ISIGALFIAG LIPALCLLVL LLIAAVIFGK RINVDDAYPV RMPTRQLLIG AAVGLVMILM
IGKGVVAGIA TSTEISAFAV VYAIVVGRLA FGELTLKATV KLFVDTAALS GMLLFIVACA
TSLSFALTIE MIPQQCAQLL VAIGADYGPW LFLLLSIVIL IIFGAVLEGA PALIIFAPIL
VPIATQLGFN PLHYAIVMIL AMGFGLFSPP IGLGLYTTCA ICGVPMQDVI KPMAKYLLII
LLGIIVIALF PALTTWLPTR LGY
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