Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0108 |
Symbol | |
ID | 5603187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 116464 |
End bp | 117633 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640935594 |
Product | integrase family protein |
Protein accession | YP_001476346 |
Protein GI | 157368357 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCTAA CTGACATACA AATCCGACGT TCCAAACCGC AAGAAAAGCC CTATACCCTC AACGATGGTC AAGGCTTGTC CCTTCTTATC AATACTGACG GCAGTAAAGG CTGGCGCTTT CGCTATCGCT ATGCCGGAAA AGCCAAGTTG ATGTCCTTTG GCACCTACCC CTTGGTAACG CTGGCTGAGG CGCGAGAAAA GCGTGGGGAA GCCCGTAAGC AGGTTGCGAA TGGCATTGAC CCAGTGGCAG ATAAAAAGGC GCAAAAGCTC GCGCAGAAAC TTTCTTTCGA GAACTCCTTT GAAGCGATTA GCCGTGAATG GCATACGAAC AAGGCTGACC GTTGGACTCT AGCCTACAGG GAAGAGATCA TGCGTACCTT TGAGCAGGAT GTGTTCCCTC ATATTGGCCA ACGCCCCATT GCCGAAATTA AGCCCTTGGA ACTGCTGGAA GTACTGCGGC GTATTGAAAA ACGCGGAGCA TTGGAGAAGA CCCGCAAGAT TCGCCAGCGC TGTGGAGAGG TATTTCGTTA TGCAATTATT ACCGGTAGGG CGGAGTATAA CCCAGCCCCA GATCTCGCCA GCGCGCTAGC CGTTCCCAAA CAAAAGCACC ATCCGTTCCT TTCGGCCGAG GAACTACCTT ACTTTGTTAA GGATTTGGAA GGATATACCG GTAGCATCAT CACTAAGAAT GCAGCGAAGA TCGTTATGCT GACCGGCGTG CGCACGCAAG AAATGCGCTT TGCCACGTGG GAAGAGATCG ATTTTGAGCG TGCAATCTGG GAGATCCCCG CAGCACGCAT GAAAATGCGC CGCCTGCACA TTGTGCCGCT CTCTACTCAG GTGGTTGAGC TGTTCAAACA GCTACAACCG ATCACCGGTC ACTATCCTTA CATTTTCATT GGACGAAACA ACCGCAGAAA GCCTATAAGT AAGGAAAGTG TGAATCAGGT TATAGAGCTG CTGGGATATA AGGGGCGAGC CACCGGTCAC GGTTTCAGGC ATACGATGTC CACTATCCTA CATGAACAAG GGTTTGATTC CGCATGGATT GAGATGCAAC TTGCGCATGT TGACAAGAAT GGTATTCGAG GTACTTATAA TCATGCTCAA TATTTTGCTC AGCGACAGTC TATGATGCAA TGGTATTCTG ACAATATTTT AGTGTTATGA
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Protein sequence | MLLTDIQIRR SKPQEKPYTL NDGQGLSLLI NTDGSKGWRF RYRYAGKAKL MSFGTYPLVT LAEAREKRGE ARKQVANGID PVADKKAQKL AQKLSFENSF EAISREWHTN KADRWTLAYR EEIMRTFEQD VFPHIGQRPI AEIKPLELLE VLRRIEKRGA LEKTRKIRQR CGEVFRYAII TGRAEYNPAP DLASALAVPK QKHHPFLSAE ELPYFVKDLE GYTGSIITKN AAKIVMLTGV RTQEMRFATW EEIDFERAIW EIPAARMKMR RLHIVPLSTQ VVELFKQLQP ITGHYPYIFI GRNNRRKPIS KESVNQVIEL LGYKGRATGH GFRHTMSTIL HEQGFDSAWI EMQLAHVDKN GIRGTYNHAQ YFAQRQSMMQ WYSDNILVL
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