Gene Spro_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0101 
Symbol 
ID5604681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp108950 
End bp110134 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content60% 
IMG OID640935586 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001476339 
Protein GI157368350 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4214] ABC-type xylose transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA ACACGCAGTA TGAAGCGATC GTGCCGGCAA TGGTGGAGAA AAACCCCATA 
GTGAAACTAA AATCCATCAA TTTGCAGGTG TTTGTGATGT TGGCGGCGAT AGTCGTCATT
ATGCTGTTCT TTACCTTTAC CACCGAAGGG GCCTATCTCA GCGCGCGTAA TATTTCCAAC
CTGCTGCGCC AGACGGCGAT CACCGGCATT TTGGCGGTCG GCATGGTGTT CGTGATTGTT
TCGGCAGAAA TCGATCTGTC GGTCGGCTCA ATGATGGGCC TGCTGGGCGG GGCGGCGGCG
ATTTTTGACG TCTGGCTGGG TTGGCCACTG CCGTTGACCA TCGTGGTGAC GCTGCTGGCC
GGCCTGCTGT TGGGGGCCTG GAACGGCTGG TGGGTAGCCT ATCGCAAGGT TCCGTCGTTT
ATCGTTACCC TGGCCGGGAT GCTGGCCTTT CGAGGCATCC TGATCGGCAT TACCAATGGC
ACCACGGTCG CGCCGACCAG CGGCGCGATG TCGCAAATTG GCCAGAGCTA TTTGCCGAAC
GGCCTGGGTT TTGGCATCGG TGCCGTTGGG TTGATGCTGT TTGTCGCCTG GCAGTGGCGG
CGACGCAGTC GGCGTGCCCA GCTCGGTTTG CCGGTGGCGA CAGCAGGCGG TGACGTCACC
CGACAAAGCA TTTTGGCGCT GCTGGTGCTC GGGGCTATCT ATTTGCTCAA TGATTACCGT
GGGGTACCGA CGCCGGTGCT GATCCTCACC GCACTGATGT TGGCGGGGAT ATTTATGGCC
ACCCGCACCG CTTTTGGCCG TCGGATCTAC GCCATCGGCG GCAATATTGA CGCTGCGCGG
CTGTCGGGCG TTAACGTCGA GCGCACCAAG CTGGCGGTGT TCGCCATCAA CGGCCTGATG
GTGGCGATTG CCGGGTTGAT CCTCAGTTCG CGCCTGGGTG CCGGTTCGCC TTCGGCGGGT
AATATCGCCG AGTTGGACGC CATCGCCGCC TGCGTGATTG GCGGCACCAG CCTGGCGGGG
GGCATCGGTA GCGTGGCCGG CGCGGTGATG GGCGCATTCA TTATGGCGTC GCTGGATAAC
GGCATGAGCA TGCTGGACGT GCCGACCTTC TGGCAGTACA TCGTCAAGGG CGCCATTTTG
CTGCTGGCGG TATGGATGGA CTCCGCCACC AAGCGCCGGG CATAA
 
Protein sequence
MSKNTQYEAI VPAMVEKNPI VKLKSINLQV FVMLAAIVVI MLFFTFTTEG AYLSARNISN 
LLRQTAITGI LAVGMVFVIV SAEIDLSVGS MMGLLGGAAA IFDVWLGWPL PLTIVVTLLA
GLLLGAWNGW WVAYRKVPSF IVTLAGMLAF RGILIGITNG TTVAPTSGAM SQIGQSYLPN
GLGFGIGAVG LMLFVAWQWR RRSRRAQLGL PVATAGGDVT RQSILALLVL GAIYLLNDYR
GVPTPVLILT ALMLAGIFMA TRTAFGRRIY AIGGNIDAAR LSGVNVERTK LAVFAINGLM
VAIAGLILSS RLGAGSPSAG NIAELDAIAA CVIGGTSLAG GIGSVAGAVM GAFIMASLDN
GMSMLDVPTF WQYIVKGAIL LLAVWMDSAT KRRA