Gene Spro_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0096 
Symbol 
ID5606984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp101685 
End bp103079 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content60% 
IMG OID640935581 
Productputative deaminase 
Protein accessionYP_001476334 
Protein GI157368345 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAA ACCAACAACA AAGCCGCAGA GCTTTCCTCA GCCAAACCGG CAAAATCACC 
ACTGCCTGCG CGGTGATCGG CCTGACCGGC GGCGTGGCGC AGGCCGCCGT CCCCACTGGC
AGCCCTTGTT TACCGGAGGC CCAACCCATG ACCCTGACCG ACAGCCACTA CTGGCTGAGC
GATGTGCGGC TGGAAGAGGG TTTCGAGTAC GATGGCGACA CGGTGATCGG CACCCGCACC
GCGCTCTATC AGCTTGAAAT CAAAGACGGC AAGATTGCGG CCATCCACCC GAAGGATGCC
GCGGCCCCCG CTGGCGTACC GCGCTATCAA GCACAGGGCC AGTTACTGTT ACCGGCATTT
CGCGACATGC ATATCCATCT GGATAAAACC TTTTACAGCG GCCCATGGCA GGCACCGCGC
CCGCGCCAGG GCAAAACCAT CATGGATATG ATCGCGCTGG AACAAACATT AATCCCCAAA
CTGTTGCCCA CCTCGCAACA GCGCGCAGAA AACCTGATCG CCCTGCTGCA ATCCAAAGGC
AGCACAGTGG CGCGCAGCCA CTGCAATATC GATCCGGTCA GCGGGCTGAA AAGCCTGGAA
CACCTGCAGC GCGCACTGGA AAATCACCGG GCAGATTTTA GCTGTGAAAT CGTCGCCTTC
CCGCAGCACG GGCTGCTGCA TTCCAAAGTC GACGGCTTGA TGCGCGAAGC CATGCAGATG
GGAGTGCAAT ACGTTGGCGG GCTGGATCCG ACCAATGTCG ACGGGGCGAT GGAGCAGTCG
CTGGATGCCA TGTTCCAGAT TGCGCTCGAT ACCGGCAAAG GCGTCGATAT CCACCTGCAC
GAAACCAGCC CGGCCGGGGT GGCAGCCATC AACTACATGA TTACCACCGT AGAAAAGAAC
CCTTCGCTAC GCGGCAAAGT CACCATCAGC CATGCCTTTG CCCTGACCGC GCTGAACCCG
AATGAATTAG AGGAAACCGC CACCCGACTG GCGGCGCAGC AAATCACCAT CGCCTCGACG
GTGCCGATCG GTGGGTTGAT GATGCCACTG CCGCAGCTCA GTGAAAAAGG GGTATTTGTG
ATGACCGGAA CCGACAGCGT GATCGACCAT TGGTCACCGT TCGGCACCGG CGATATTCTG
GAAAAAGCCA ACCTTTACGC CCAGCTCTAT CGGGGTTCCG ACGAGTTCCA TCTGTCGCGC
GCCATGGCGA TTTCCACCGG CGGCGTGCTG CCGCTGAATG ACAAAGGCCA ACGGGTGTGG
CCCAAAGCCG GGGACAGCGC GGAGTTCGTG TTGATCGACG CCAGTTGCTC CGCCGAAGCG
GTAGCCCGTC TGCCAACGCG CCGCACCACC TTCCATCAAG GGCGGCTGGT GGCCGGCCAG
GTTGGCAAAG CCTGA
 
Protein sequence
MEKNQQQSRR AFLSQTGKIT TACAVIGLTG GVAQAAVPTG SPCLPEAQPM TLTDSHYWLS 
DVRLEEGFEY DGDTVIGTRT ALYQLEIKDG KIAAIHPKDA AAPAGVPRYQ AQGQLLLPAF
RDMHIHLDKT FYSGPWQAPR PRQGKTIMDM IALEQTLIPK LLPTSQQRAE NLIALLQSKG
STVARSHCNI DPVSGLKSLE HLQRALENHR ADFSCEIVAF PQHGLLHSKV DGLMREAMQM
GVQYVGGLDP TNVDGAMEQS LDAMFQIALD TGKGVDIHLH ETSPAGVAAI NYMITTVEKN
PSLRGKVTIS HAFALTALNP NELEETATRL AAQQITIAST VPIGGLMMPL PQLSEKGVFV
MTGTDSVIDH WSPFGTGDIL EKANLYAQLY RGSDEFHLSR AMAISTGGVL PLNDKGQRVW
PKAGDSAEFV LIDASCSAEA VARLPTRRTT FHQGRLVAGQ VGKA