Gene Spro_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0086 
Symbol 
ID5607161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp90969 
End bp91604 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID640935571 
Productformate dehydrogenase-O subunit gamma 
Protein accessionYP_001476324 
Protein GI157368335 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG AAAAGCGTAT TCAGCGCTAC AGCGCGCCGG AGCGGATTAA CCACTGGATT 
GTGGCGTTCT GCTTTGTGTT CGCCGCCATT AGCGGGCTGG GGTTCTTTTT CCCCTCCTTC
AACTGGTTGA TGAACATTCT CGGCACGCCG CAGTTGGCGC GTATTCTGCA CCCCTTCGTT
GGGGTGATTA TGTTTGCGGC CTTCCTGCTG ATGTTCCTGC GCTACTGGAA GCATAACCTG
ATTAACCGCG AAGACATCGT CTGGGCCAAA AACATCCAAA AAATCGTCAT GAACGAGGAA
GTGGGTGACA CCGGGCGTTA TAATTTCGGT CAGAAGTGCG TATTCTGGGC GGCAATCATT
AGTCTGGTGC TGTTGCTGGC CAGCGGTGTG GTGATCTGGC GGCCGTACTT TGCGCCGTCC
TTCCCGATAC CGCTGATCCG TATCGCGTTG CTGGTGCATT CGCTGGCGGC GGTGGGGCTT
ATCATTGTGA TTATGGTGCA TATTTACGCC GCGTTGTGGG TAAAAGGCAC CATTACCGCG
ATGGTGGAAG GCTGGGTGCC GGCGGCCTGG GCTAAAAAAC ATCACCCGCG TTGGTACCGA
GAGGTCCGCG AGAAACAACA GGAAGACAAA CCCTGA
 
Protein sequence
MKKEKRIQRY SAPERINHWI VAFCFVFAAI SGLGFFFPSF NWLMNILGTP QLARILHPFV 
GVIMFAAFLL MFLRYWKHNL INREDIVWAK NIQKIVMNEE VGDTGRYNFG QKCVFWAAII
SLVLLLASGV VIWRPYFAPS FPIPLIRIAL LVHSLAAVGL IIVIMVHIYA ALWVKGTITA
MVEGWVPAAW AKKHHPRWYR EVREKQQEDK P