Gene Spro_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0050 
Symbol 
ID5606860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp50164 
End bp51822 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content59% 
IMG OID640935535 
Producthypothetical protein 
Protein accessionYP_001476288 
Protein GI157368299 
COG category[R] General function prediction only 
COG ID[COG2985] Predicted permease 
TIGRFAM ID[TIGR01625] AspT/YidE/YbjL antiporter duplication domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.259185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA TCGCCCTGAC CGTCAGCATG TTGGCGTTGG TGGCCGTTCT CGGGCTGTGG 
ATGGGTAACT GGAAGATCTA TGGGGTGGGG CTGGGCATTG GTGGGGTGCT GTTCGGCGGC
ATTATCGTTG GGCATTTCGC CCAGAGCTGG CAGCTCAATC TTAATGGCGA CATGCTGCAT
TTCATCCAGG AATTCGGCCT GATCCTGTTC GTGTACACCA TTGGTATTCA GGTCGGTCCG
GGGTTTTTCT CCTCCTTGCG GGTGTCCGGG CTACGGCTCA ACGGCTTCGC CATTTTACTG
GTGCTGGTCG GTGGGTTGGT CGCGGCGGTG GTTCACAAGC TGTTTGCCGT GCCGTTGCCG
ATTATTCTTG GCGTGTTCTC CGGGGCGGTC ACCAATACTC CGGCGCTCGG CGCTGGGCAG
CAAATCCTTA CCGATTTGGG TTCAGATCCG GCACTGGTTG ATCGCATGGG TATGGGTTAC
GCCATGGCCT ATCCGTTTGG CATCTGCGGC ATTTTATTGG TGATGTGGCT GATACGCCTG
TTTTTCCGCA TTAACATCGA GCAAGAGGCG CAGGCGTTTG CAAGCAGCCT GGGCAACCAG
CGCGAACTGC TGCATACCAT GAACGTGGCG GTGCGTAACC CGAATCTGCA GGGGATGGCT
ATCAAAAATG TACCGCTGCT GAACGGCGAG GACATCATCT GTTCTCGCCT GAAACGCGGC
GATTTGCTGA TGGTGCCGGC ACCGCTTGAA AAGCTGGAGC TGGGTGATTA TCTGCATCTG
GTGGGCAAGC GCGAAAGCCT GGAAAATGCC CGGCTGGTGA TTGGCGAAGA GGTCGACGTC
TCGCTGTCAA CGCGCGGTAC AGAGCTGCAG GTGGTGAGAG CAGTGGTGAC CAATGAGAAG
GTGCTGGGCA GTAAAATCCG CGATCTGAAC CTGAAGCAGA AGTACGACGT GGTGATCTCG
CGACTCAACC GTTCCGGGGT CGAGCTGGTG GCCGGCAGCA ATGTGACGCT GCAATTTGGT
GACATCCTCA ACCTGGTGGG GCGGCCCGAA TCTATCGAGG CGGTGGCGGC GATTGTCGGC
AACGCCCAAC AGAAGTTGCA GCAGGTGCAA ATGCTACCGG TGTTTATCGG AATCGGCCTC
GGCGTGCTGT TGGGATCCAT CCCGCTGTTT ATACCGGGTT TCCCGGCGGC ATTGCGTCTG
GGGCTGGCCG GTGGCCCACT GGTGGCGGCG CTGATCCTTG GGCGTATCGG CAGCATCGGC
AAGCTGTACT GGTTTATGCC GCCCAGTGCC AATCTGGCGT TGCGTGAACT GGGGATCGTG
CTGTTTCTGG CGGTGGTCGG GTTGAAGTCG GGCGGTAACT TTGTCGATAC GCTGATTAAT
GGCGAAGGGC TGGCATGGAT TGGCTATGGC GCGCTGATTA CTGCGATCCC TCTGTTTAGC
GTGGGCGTAC TGGCGCGGAT GGTGGGCAAG ATGAACTACC TGACGCTGTC CGGCATGCTG
GCAGGGTCAA TGACCGATCC GCCGGCGCTG GCCTTCGCTA ACGGCCTGCA CCCGACCAGC
GGCGCTGCCG CACTGTCTTA CGCCACGGTT TATCCTTTGG CGATGTTCCT GCGCATCATG
TCGCCACAGT TGCTGGCGGT ACTGTTCTGG GCGATGTAA
 
Protein sequence
MSEIALTVSM LALVAVLGLW MGNWKIYGVG LGIGGVLFGG IIVGHFAQSW QLNLNGDMLH 
FIQEFGLILF VYTIGIQVGP GFFSSLRVSG LRLNGFAILL VLVGGLVAAV VHKLFAVPLP
IILGVFSGAV TNTPALGAGQ QILTDLGSDP ALVDRMGMGY AMAYPFGICG ILLVMWLIRL
FFRINIEQEA QAFASSLGNQ RELLHTMNVA VRNPNLQGMA IKNVPLLNGE DIICSRLKRG
DLLMVPAPLE KLELGDYLHL VGKRESLENA RLVIGEEVDV SLSTRGTELQ VVRAVVTNEK
VLGSKIRDLN LKQKYDVVIS RLNRSGVELV AGSNVTLQFG DILNLVGRPE SIEAVAAIVG
NAQQKLQQVQ MLPVFIGIGL GVLLGSIPLF IPGFPAALRL GLAGGPLVAA LILGRIGSIG
KLYWFMPPSA NLALRELGIV LFLAVVGLKS GGNFVDTLIN GEGLAWIGYG ALITAIPLFS
VGVLARMVGK MNYLTLSGML AGSMTDPPAL AFANGLHPTS GAAALSYATV YPLAMFLRIM
SPQLLAVLFW AM