Gene Spro_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0044 
Symbol 
ID5607212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp44376 
End bp45524 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content57% 
IMG OID640935529 
Productgalactonate dehydratase 
Protein accessionYP_001476282 
Protein GI157368293 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.360565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA CCAAAATGAC CACCTATCGG CTACCGCCGC GCTGGATGTT CCTGAAGATT 
GAAACCGATG AAGGCATCGT CGGTTGGGGT GAACCGGTGA TTGAAGGGCG CGCACGCAGT
GTGGAGGCGG CGGTGCACGA GCTGTCGGAA TATGTGGTCG GCCAGGATCC GGCGCGGATT
AACGATATCT GGCAAACCCT CTACCGCGGC GGTTTCTATC GCGGCGGCCC GATCCTGATG
AGTGCGATCG CCGGTATTGA TCAGGCGCTG TGGGATATCA AAGGCAAGGC GCTGGGCGTA
CCGGTTTATC AGCTATTGGG CGGATTGGTG CGTGACAAAA TCAAGGCGTA TAGCTGGGTG
GGCGGCGATC GTCCTTCTGA CGTGATTGCC GGCATCAACA AGCTGACGGA AATCGGCTTC
GACACCTTTA AGCTGAACGG TTGCGAAGAG ATGGGCATTA TCGACAGTGC GCGCAAGGTG
GATGCTGCGG TGGCGGTGGT GGCGCAGATC CGCGAAGCCT TTGGTAACCG TATCGAGTTC
GGTCTGGATT TCCATGGTCG CGTCGATGCG CCGATGGCAA AAATCCTGAT CAAAGAGCTG
GAGCCGTACC GTCCGCTGTT TATTGAAGAG CCGGTGCTGG CGGAACAGGC AGAGTACTAT
CCGCGCCTGG CGGCGCAGAC GCATATCCCG ATTGCCGCCG GTGAACGTAT GTATTCGCGT
TTTGATTTCA AACGGGTGCT GGCCGATGGC GGCCTGGCGA TTATTCAGCC TGATCTGTCT
CATGCCGGTG GCATCACCGA ATGCTTCAAG ATTGCCGCCA TGGCGGAGAC CTATGATGTG
GCGCTGGCTC CGCATTGCCC ACTGGGGCCG ATTGCGCTGG CTGCCTGTCT GCATGTGGAC
TTTGTGGCGC GTAACGCGGT GTTCCAGGAG CAGAGCATGG GCATTCACTA CAATCAGGGG
GCCGAACTGC TGGACTACGT AGTGAATAAA GACGATTTCA AAATGACCGA CGGCCACTTC
TACCCACTGA CTAAACCGGG CCTCGGGGTG GAAATTAACG AAGAGCTGGT GATCGAGCGC
AGTAAACAAG CGACGGACTG GCGTAATCCC GTGTGGCGTT ATCCGGACGG CGCAGTTGCC
GAGTGGTAA
 
Protein sequence
MKITKMTTYR LPPRWMFLKI ETDEGIVGWG EPVIEGRARS VEAAVHELSE YVVGQDPARI 
NDIWQTLYRG GFYRGGPILM SAIAGIDQAL WDIKGKALGV PVYQLLGGLV RDKIKAYSWV
GGDRPSDVIA GINKLTEIGF DTFKLNGCEE MGIIDSARKV DAAVAVVAQI REAFGNRIEF
GLDFHGRVDA PMAKILIKEL EPYRPLFIEE PVLAEQAEYY PRLAAQTHIP IAAGERMYSR
FDFKRVLADG GLAIIQPDLS HAGGITECFK IAAMAETYDV ALAPHCPLGP IALAACLHVD
FVARNAVFQE QSMGIHYNQG AELLDYVVNK DDFKMTDGHF YPLTKPGLGV EINEELVIER
SKQATDWRNP VWRYPDGAVA EW