| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0028 |
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| Symbol | |
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| ID | 5606327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 27544 |
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| End bp | 29181 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640935513 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001476266 |
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| Protein GI | 157368277 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.15409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0935166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCGC AACGCAATCT TCTCCTCATC GCTCTGCTGT TCGTGTCTTT CATGATCTGG
CAAGCCTGGC AAACGGACAA TGCTCCGCAA CCAGTCGCGC AGACCACGCA ACAGACTTCG
AACCCAGCTA CCGGTGATGC CGCAAGCTCA GCAGTTCCAG CCAGTGGCCA AGGTAAACTG
ATTACCGTAA ACACTGACGT GCTGTCGCTG ACCATCAACA CCCGTGGTGG TGATATCGAG
CAGGCTAAAC TGTTGGCCTA CCCTGACACT CTGGGTTCAT CGACGCCATT CCAGCTGCTG
GAAACCACAC CGGCATTTGT CTATCAGGCG CAAAGCGGCC TGACCGGCAG AAACGGCCCG
GATAACCCGG CAAATGGCGA ACGTCCTCTG TTCCAGGCGG CGCAGGACAG CTATACCCTG
CCGGAAGGCC AGGAAGAGTT GCGCATCCCG CTGACCTTTA CCGGTAAAGA TGGCGCTATC
TACACCAAAA CTTTCGTGCT CAAACGCAAT CATTACGCGG TTGCCGTTGA CTACAACGTC
GACAACAAGA GCACCACTCC GCTGGAACTG ACCCTGTTCG GCCAACTGAA GCAGACCACC
GAGCTGCCTA AGCACCGTGA CACCGGCAGC AACAACTTTG CCCTGCACAC CTTCCGTGGC
GCGGCTTACT CTTCCAGCGA TGACAAATAT CAGAAGTATG CGTTCGATAA GGACGAGAAC
CTGAGTGTCA CCACCCAGGG CGGTTGGGTT GCAATGCTGC AACAATACTT CGCCACCGCG
TGGGTACCGG CAACTCAGGG TAGCAATACC TTCTATACCG CCAAGCCTGG CGACAACCTG
TCTACCATCG GCTTCAAATC TACTCCGGTA GTGGTGCAGC CTGGTGCGCA GCAGCAACTG
AACGCCACCC TGTGGGTAGG CCCGGAACTG CAGGATCAGA TGGCACAACT GGCGCCGCAT
CTGGACCTGA CCGTGGATTA CGGTTGGTTG TGGTTCATCT CCCAACCGCT GTTCAAACTG
CTGAAGTTCA TCCACGGCTT TATCGGTAAC TGGGGCTTCT CAATTATCAT CATCACCTTC
ATCGTGCGCG GCATCATGTA CCCGCTGACC AAAGCGCAGT ACACCTCGAT GGCGAAAATG
CGCATGCTGC AGCCAAAACT GCAGGCGATG CGTGAGCGTA TCGGTGATGA CAAACAGCGC
ATGAGTCAGG AAATGATGGC GCTGTACAAG TCTGAGAAAG TGAATCCGTT GGGGGGTTGT
CTGCCGCTGG TTATCCAGAT GCCAATCTTC CTGGCGCTGT ACTACATGTT GATGGGCTCG
GTTGAGCTGC GCCACGCGCC GTTCGCTTTG TGGATCCACG ACCTGTCGGC GCAAGACCCG
TACTACATCT TGCCAATCCT GATGGGCGTG ACGATGTTCT TCATTCAGAA GATGTCGCCG
ACCACCGTGA CTGATCCGAT GCAGCAGAAA ATCATGACCT TCATGCCGGT GATCTTCACA
GTGTTCTTCC TGTGGTTCCC GTCCGGTCTG GTGCTGTACT ACATCGTCAG TAACCTGGTG
ACCATCCTCC AGCAGCAGTT GATTTACCGC GGCCTGGAAA AACGTGGTTT ACACAGCCGC
GACAAGAAAA AAACCTAA
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| Protein sequence | MDSQRNLLLI ALLFVSFMIW QAWQTDNAPQ PVAQTTQQTS NPATGDAASS AVPASGQGKL
ITVNTDVLSL TINTRGGDIE QAKLLAYPDT LGSSTPFQLL ETTPAFVYQA QSGLTGRNGP
DNPANGERPL FQAAQDSYTL PEGQEELRIP LTFTGKDGAI YTKTFVLKRN HYAVAVDYNV
DNKSTTPLEL TLFGQLKQTT ELPKHRDTGS NNFALHTFRG AAYSSSDDKY QKYAFDKDEN
LSVTTQGGWV AMLQQYFATA WVPATQGSNT FYTAKPGDNL STIGFKSTPV VVQPGAQQQL
NATLWVGPEL QDQMAQLAPH LDLTVDYGWL WFISQPLFKL LKFIHGFIGN WGFSIIIITF
IVRGIMYPLT KAQYTSMAKM RMLQPKLQAM RERIGDDKQR MSQEMMALYK SEKVNPLGGC
LPLVIQMPIF LALYYMLMGS VELRHAPFAL WIHDLSAQDP YYILPILMGV TMFFIQKMSP
TTVTDPMQQK IMTFMPVIFT VFFLWFPSGL VLYYIVSNLV TILQQQLIYR GLEKRGLHSR
DKKKT
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