Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0019 |
Symbol | |
ID | 5604078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 17877 |
End bp | 18617 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640935504 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001476257 |
Protein GI | 157368268 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.973133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.345394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCA GCGTCATTTA CGACAATCTG GGTTATCTGC TGTGGGGCAC CTGGCCGGAC GGCCCGCTGG GCGGCGCAGC GCTGACGTTG GCGATCAGCC TGATGGCCGG TGTGGCTTCG GCCATTATCG GCACGCTGTT GGGGGTGGCA CTGGCGATGT CACGCGGCGT AGCGGCCGGG TTACTGGCAG CGCTGCTGGG ATTTTTCCGC GCCATCCCGG TGATCATGCT GATTTTCTGG ACCTATTTCC TGTTACCGAT CGTTTTTGGC GTGGATATTC CGGAAATCAC CACCGTGGTT TGCGCCCTGG CGCTGATCGC CTCGGCCTAT CTGGCTCACG CGGTGAAGGC GGGGATCGCC GCCATCGGTC CGGGGCAGTG GCAGGCGGGT TTATCGCTAG GATTGACTCG CTGGCAAACG CTGCGAATGA TCGTGCTGCC GCAGGCGCTG CGCATGATGG TGCCTTCGTT TATCAACCAG TGGATTTCGT TGATCAAGGA CACTTCGCTG GCCTATATCG TCGGCGTCGG TGAGCTGACG TTCCTGGCGA CCCAGGTCAA CAACCGCAGC ATGGTGTACC CGATGGAAGT CTTCCTGTTT ATCGCCCTGG TGTACTTTGT GTTTTGTCTG GCGCTGGATC TGCTGGCCAA TGCGGTCAAC CGCCGCTTTA GCCCGCAGAC CCGGGCGTTG AAACGCTCAT GGCGCTGGTG GCGCAATAAG CCGCCGTTGC CGGCTAGCTA G
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Protein sequence | MDFSVIYDNL GYLLWGTWPD GPLGGAALTL AISLMAGVAS AIIGTLLGVA LAMSRGVAAG LLAALLGFFR AIPVIMLIFW TYFLLPIVFG VDIPEITTVV CALALIASAY LAHAVKAGIA AIGPGQWQAG LSLGLTRWQT LRMIVLPQAL RMMVPSFINQ WISLIKDTSL AYIVGVGELT FLATQVNNRS MVYPMEVFLF IALVYFVFCL ALDLLANAVN RRFSPQTRAL KRSWRWWRNK PPLPAS
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