Gene Spro_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0019 
Symbol 
ID5604078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp17877 
End bp18617 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content60% 
IMG OID640935504 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001476257 
Protein GI157368268 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.973133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.345394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCA GCGTCATTTA CGACAATCTG GGTTATCTGC TGTGGGGCAC CTGGCCGGAC 
GGCCCGCTGG GCGGCGCAGC GCTGACGTTG GCGATCAGCC TGATGGCCGG TGTGGCTTCG
GCCATTATCG GCACGCTGTT GGGGGTGGCA CTGGCGATGT CACGCGGCGT AGCGGCCGGG
TTACTGGCAG CGCTGCTGGG ATTTTTCCGC GCCATCCCGG TGATCATGCT GATTTTCTGG
ACCTATTTCC TGTTACCGAT CGTTTTTGGC GTGGATATTC CGGAAATCAC CACCGTGGTT
TGCGCCCTGG CGCTGATCGC CTCGGCCTAT CTGGCTCACG CGGTGAAGGC GGGGATCGCC
GCCATCGGTC CGGGGCAGTG GCAGGCGGGT TTATCGCTAG GATTGACTCG CTGGCAAACG
CTGCGAATGA TCGTGCTGCC GCAGGCGCTG CGCATGATGG TGCCTTCGTT TATCAACCAG
TGGATTTCGT TGATCAAGGA CACTTCGCTG GCCTATATCG TCGGCGTCGG TGAGCTGACG
TTCCTGGCGA CCCAGGTCAA CAACCGCAGC ATGGTGTACC CGATGGAAGT CTTCCTGTTT
ATCGCCCTGG TGTACTTTGT GTTTTGTCTG GCGCTGGATC TGCTGGCCAA TGCGGTCAAC
CGCCGCTTTA GCCCGCAGAC CCGGGCGTTG AAACGCTCAT GGCGCTGGTG GCGCAATAAG
CCGCCGTTGC CGGCTAGCTA G
 
Protein sequence
MDFSVIYDNL GYLLWGTWPD GPLGGAALTL AISLMAGVAS AIIGTLLGVA LAMSRGVAAG 
LLAALLGFFR AIPVIMLIFW TYFLLPIVFG VDIPEITTVV CALALIASAY LAHAVKAGIA
AIGPGQWQAG LSLGLTRWQT LRMIVLPQAL RMMVPSFINQ WISLIKDTSL AYIVGVGELT
FLATQVNNRS MVYPMEVFLF IALVYFVFCL ALDLLANAVN RRFSPQTRAL KRSWRWWRNK
PPLPAS