Gene Spro_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0018 
Symbol 
ID5604077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp17162 
End bp17875 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content60% 
IMG OID640935503 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001476256 
Protein GI157368267 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.219606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGG ACTGGCTGCT GGCGCCGGAG TATCTGAGCT GGCTGTGGCG GGGTTTCCTG 
CTGACGCTGT GGCTTTCTGC CTGCGCGAGC CTGGCCGCCA CGCTGTTGGG GTTTTTACTG
ACCGCGATGC GTGACAGCCG CCTGCGGGCA CTGCGTTGGC TGGCGGTGGG TTACAGTTCG
TTGTTTCGCA ATACGCCGTT GCTGGTACAG CTGTTCTTCT GGTATTTCGC CGCCGGGCAG
ATCCTGCCGT CCGCCGCCAT GCAGTGGCTG AATACTTCAC ATCAAATCGG CCCGCTTGAG
TGGCCGTCGT TTGAATTTCT CGCCGGTTTT TTCGGCCTGA CGCTGTACTC CAGCGCTTTT
ATCGCCGAAG AGATCCGTTC CGGCATCCGT GGTGTCGCCG GTGGGCAAAA ATATGCGGCC
AACGCGCTGG GATTAACCGG CTGGCAGGCG ATGCGCTATG TGGTGCTGCC ACAGGCGCTG
AAAATCGCCA TGCCGCCGCT GCTGGGCCAG TATATGAACG TGATAAAAAA CTCCTCGCTG
ACCATGGCGA TCGGCGTTGC CGAACTGTCC TATGCTTCGC GTCAGGTGGA AACCGAGACG
CTGCGCACCT TCCAGGCGTT TGGCGTGGCG ACGGTGCTGT ACATCGCCAT CATTGCGCTG
TTGGAAGGCT GGGGTATGTG GCGACAGCAG CGTAAACCGC TGAGAGGGCA CTAA
 
Protein sequence
MNLDWLLAPE YLSWLWRGFL LTLWLSACAS LAATLLGFLL TAMRDSRLRA LRWLAVGYSS 
LFRNTPLLVQ LFFWYFAAGQ ILPSAAMQWL NTSHQIGPLE WPSFEFLAGF FGLTLYSSAF
IAEEIRSGIR GVAGGQKYAA NALGLTGWQA MRYVVLPQAL KIAMPPLLGQ YMNVIKNSSL
TMAIGVAELS YASRQVETET LRTFQAFGVA TVLYIAIIAL LEGWGMWRQQ RKPLRGH