Gene Spro_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0008 
Symbol 
ID5603366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5664 
End bp7046 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content54% 
IMG OID640935493 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_001476246 
Protein GI157368257 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.366806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.022382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTG GAAAGATTAT CCAGGTAATC GGCGCCGTAG TGGACGTCGA GTTCCCTCAG 
GATGCCGTAC CAAAAGTGTA CAACGCTCTT GAGGTAGAAA ACGGTGCCAA TAAGCTGGTG
CTGGAAGTTC AGCAACAGTT GGGCGGTGGC GTGGTTCGCT GTATCGCAAT GGGGACCTCT
GATGGTCTGC GTCGCGGTCT GAAAGTCACT GACCTGGACC ACCCAATTGA AGTACCGGTA
GGTAAAGCTA CCCTGGGCCG TATCATGAAC GTATTGGGTG AACCAATCGA CATGAAGGGC
GATATCGGCG AAGAAGAACG TTGGGCGATT CACCGTCCGG CGCCAAGCTA CGAAGATTTG
GCCAACTCCC AGGATCTGCT GGAAACCGGT ATCAAGGTAA TGGACCTGAT CTGCCCGTTC
GCCAAGGGTG GTAAAGTCGG TCTGTTCGGT GGTGCGGGTG TTGGTAAAAC CGTAAACATG
ATGGAGCTGA TCCGTAACAT CGCGATCGAG CACTCCGGTT ATTCTGTGTT TGCGGGCGTG
GGTGAGCGTA CTCGTGAGGG TAACGACTTC TACCACGAAA TGAACGACTC CAACGTACTG
GATAAAGTAT CCCTGGTTTA CGGCCAGATG AACGAGCCAC CGGGTAACCG TCTGCGCGTT
GCTCTGACCG GTCTGACCAT GGCGGAGAAA TTCCGTGACG AAGGCCGTGA CGTTCTGCTG
TTCGTTGATA ACATCTACCG TTATACCCTG GCCGGTACCG AAGTGTCCGC ACTTCTGGGC
CGTATGCCAT CGGCGGTAGG TTATCAGCCA ACGCTGGCGG AAGAGATGGG TGTTCTGCAA
GAACGTATCA CCTCTACCAA GACCGGTTCA ATCACCTCCG TACAGGCCGT TTACGTCCCT
GCGGATGACT TGACTGACCC GTCACCAGCC ACCACCTTTG CTCACTTGGA TGCAACTGTG
GTACTGAGCC GTAATATCGC TTCTCTGGGT ATCTACCCGG CCGTTGACCC GCTGGATTCT
ACCAGCCGTC AGCTGGATCC GCTGGTAGTT GGCCAGGAGC ACTACGATGT AGCGCGTGGC
GTGCAGTCCA TTCTGCAACG CTATCAGGAA CTGAAAGATA TTATCGCAAT CCTGGGTATG
GACGAGCTGT CTGAAGAAGA CAAACTGGTC GTATCCCGTG CGCGTAAAAT CCAACGCTTC
CTGTCTCAGC CGTTCTTCGT GGCAGAAGTC TTCACCGGTT CTCCGGGCAA GTTCGTATCG
CTGAAAGACA CCATTCGTGG TTTCAAAGGC ATTATGGACG GCGACTATGA CCACCTGCCT
GAACAAGCGT TCTACATGGT TGGCACCATT GAAGAAGCAG TGGAAAAAGC CAAGAAACTG
TAA
 
Protein sequence
MATGKIIQVI GAVVDVEFPQ DAVPKVYNAL EVENGANKLV LEVQQQLGGG VVRCIAMGTS 
DGLRRGLKVT DLDHPIEVPV GKATLGRIMN VLGEPIDMKG DIGEEERWAI HRPAPSYEDL
ANSQDLLETG IKVMDLICPF AKGGKVGLFG GAGVGKTVNM MELIRNIAIE HSGYSVFAGV
GERTREGNDF YHEMNDSNVL DKVSLVYGQM NEPPGNRLRV ALTGLTMAEK FRDEGRDVLL
FVDNIYRYTL AGTEVSALLG RMPSAVGYQP TLAEEMGVLQ ERITSTKTGS ITSVQAVYVP
ADDLTDPSPA TTFAHLDATV VLSRNIASLG IYPAVDPLDS TSRQLDPLVV GQEHYDVARG
VQSILQRYQE LKDIIAILGM DELSEEDKLV VSRARKIQRF LSQPFFVAEV FTGSPGKFVS
LKDTIRGFKG IMDGDYDHLP EQAFYMVGTI EEAVEKAKKL