Gene Spro_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0006 
Symbol 
ID5603364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3168 
End bp4709 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content55% 
IMG OID640935491 
ProductF0F1 ATP synthase subunit alpha 
Protein accessionYP_001476244 
Protein GI157368255 
COG category[C] Energy production and conversion 
COG ID[COG0056] F0F1-type ATP synthase, alpha subunit 
TIGRFAM ID[TIGR00962] proton translocating ATP synthase, F1 alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00898891 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0113321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA ATTCCACCGA AATCAGCGAA CTGATCAAGC AGCGCATTGC TCAGTTCAAT 
GTGGTGAGCG AAGCTCACAA TGAAGGTACT ATTGTTTCCG TCAGTGACGG GATCATCCGC
GTACACGGTC TGGCCGAAGT TATGCAGGGC GAAATGATCG CACTGCCAGG CAACCGTTAC
GCAATCGCAT TGAACCTGGA GCGCGACTCC GTAGGTGCTG TGGTTATGGG TCCGTACGCG
GATCTGGCCG AAGGCATGAA GGTAAAATGT ACCGGCCGTA TTCTGGAAGT TCCGGTTGGC
CGTGGCCTGC TGGGCCGTGT AGTTAACACC CTGGGCGCAC CTATTGACGG TAAAGGCCCG
GTTGATAACG ACGGTTTCTC CCCGGTTGAA GCTATTGCCC CTGGTGTTAT CGAGCGTCAG
TCCGTAGATC AGCCGGTTCA AACTGGCTAT AAATCTGTTG ACGCCATGAT CCCAATCGGC
CGTGGCCAGC GTGAGCTGGT GATCGGTGAC CGTCAGACAG GTAAAACTGC CCTGGCGATC
GATGCGATCA TCAACCAACG CGATTCCGGC ATCAAATGTG TTTACGTGGC TATCGGCCAG
AAAGCGTCCA CCATCGCTAA CGTGGTGCGC AAACTGGAAG AGCACGGCGC ACTGGCAAAC
ACCATCGTTG TGGTTGCTAC CGCGTCTGAA TCCGCTGCAT TGCAATACCT GGCGCCATAT
GCCGGTTGTG CGATGGGTGA ATACTTCCGT GACCGCGGTG AAGATGCGCT GATTGTTTAT
GATGACCTGT CCAAACAGGC CGTTGCATAC CGTCAGATCT CCCTGCTGCT TCGTCGTCCA
CCAGGTCGTG AAGCTTACCC AGGCGACGTA TTCTATCTCC ACTCCCGTTT GCTGGAGCGT
GCTGCGCGTG TTAACGCCGA ATACGTTGAA GCCTTCACCA AAGGTGAAGT CAAAGGCCAA
ACCGGTTCAC TGACTGCTCT GCCGATCATT GAAACCCAGG CGGGTGACGT TTCCGCGTTC
GTTCCGACCA ACGTAATCTC GATTACCGAT GGTCAGATCT TCCTGGAATC CAACCTGTTT
AACTCCGGTA TTCGTCCGGC AGTTAACCCG GGTATCTCCG TATCCCGTGT GGGCGGTGCA
GCGCAAACCA AGATCATGAA AAAACTGTCC GGTGGTATTC GTACCGCGCT GGCACAGTAT
CGTGAACTGG CTGCGTTCTC TCAGTTCGCT TCCGATCTGG ATGATGCGAC CCGCAAACAG
CTGAGCCACG GTCAGAAAGT GACCGAGCTG CTGAAACAGA AACAGTATGC GCCGATGTCC
GTCGCACAAC AGTCTCTGGT GCTGTTTGCC GCAGAACGTG GCTTCCTGAA CGACGTTGAA
GTCGCGAAAG TCGTGAGCTT CGAAGCCGCG CTGGTTGCTT ACGCAGACCG CGAGCATGCC
GAGTTGCTGA ACCACATCAA CCAAACTGGC AATTTCAACG ATGAGATCGA GGGCAAGCTG
AAAGGCATCC TCGAGACCTT CAAGAAAACC CAGTCCTGGT AA
 
Protein sequence
MQLNSTEISE LIKQRIAQFN VVSEAHNEGT IVSVSDGIIR VHGLAEVMQG EMIALPGNRY 
AIALNLERDS VGAVVMGPYA DLAEGMKVKC TGRILEVPVG RGLLGRVVNT LGAPIDGKGP
VDNDGFSPVE AIAPGVIERQ SVDQPVQTGY KSVDAMIPIG RGQRELVIGD RQTGKTALAI
DAIINQRDSG IKCVYVAIGQ KASTIANVVR KLEEHGALAN TIVVVATASE SAALQYLAPY
AGCAMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLRRP PGREAYPGDV FYLHSRLLER
AARVNAEYVE AFTKGEVKGQ TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLESNLF
NSGIRPAVNP GISVSRVGGA AQTKIMKKLS GGIRTALAQY RELAAFSQFA SDLDDATRKQ
LSHGQKVTEL LKQKQYAPMS VAQQSLVLFA AERGFLNDVE VAKVVSFEAA LVAYADREHA
ELLNHINQTG NFNDEIEGKL KGILETFKKT QSW