Gene Ssed_R0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_R0100 
Symbol 
ID5614223 
TypetRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3003172 
End bp3003248 
Gene Length77 bp 
Protein Length 
Translation table 
GC content58% 
IMG OID640933392 
ProducttRNA-Met 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.925668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00140231 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
CGCGGGATGG AGCAGTTTGG TAGCTCGTCG GGCTCATAAC CCGAAGGTCG TTGGTTCAAA 
TCCAGCTCCC GCAACCA
 
Protein sequence