| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4499 |
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| Symbol | |
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| ID | 5612536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5502592 |
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| End bp | 5503392 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935476 |
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| Product | 3-demethylubiquinone-9 3-O-methyltransferase |
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| Protein accession | YP_001476229 |
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| Protein GI | 157377629 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000152328 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAGATA AAAGCCACCT AAGCCCAAGC CTGAACAACG AAAGAAAATC AGCGCTGGAC
ACCGAAAGAG AGATCGCTAA GTTCAATGCA TTAGCCAATG AGTGGCGCGA TCCTAAAGGG
AAATTTAAGC ATGTCTTAGC CTTTAACCAG ACAAGGTTAA TCGCGATAGA GGATGCCATC
GCCTACCATT TTGAAAGAGA TCTTAATCAA GATGTCCCCT TTAGCGATCT ATCACTGCTC
GATATCGGTT GTGGTGCAGG CCTGCTTTGC GAACCATTAG CCTGGCAAGG TGCCAGAGTG
AGTGGTATCG ATGCCAGTAG CCACAATATT GCCCTGGCAC GGCAGCATGC TAACAGTAAC
TCGGTGACCG TAGACTATCG GCATTGTTTA GCTGAATCAC TATTAACCAC TGGAGAAAAA
GAGAGAATAA CTGATACTAA TCAGTATGAT GTGGTACTCA ACACTGAGGT CATCGAACAT
GTAGGCGATC AAGAAGCATT GATTCATACC TGTTGCCAAC TACTCAAACC GGGTGGATTG
CTGATCATGG CTACACTAAA CCGCACAATA AAATCATACC TGATAGGCAT TATCGGCGCC
GAATATCTGA TGCGTTACCT ACCCATAGGG ACTCACGATT GGCGTTTTTT CGTTACACCG
AAAGAGATGG ATGCCATGAT AACCCCCCAC GGTTTACGTA CCGTCAAAGC TGAGGGAATG
AGTTTTAACC CTTTGACTAA AAAGTGGAAA GTGACCAATA GCACCGACGT AAACTACCTG
CTATATGCGA TAAAAAACTA A
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| Protein sequence | MLDKSHLSPS LNNERKSALD TEREIAKFNA LANEWRDPKG KFKHVLAFNQ TRLIAIEDAI
AYHFERDLNQ DVPFSDLSLL DIGCGAGLLC EPLAWQGARV SGIDASSHNI ALARQHANSN
SVTVDYRHCL AESLLTTGEK ERITDTNQYD VVLNTEVIEH VGDQEALIHT CCQLLKPGGL
LIMATLNRTI KSYLIGIIGA EYLMRYLPIG THDWRFFVTP KEMDAMITPH GLRTVKAEGM
SFNPLTKKWK VTNSTDVNYL LYAIKN
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