| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4491 |
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| Symbol | |
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| ID | 5612567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5495305 |
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| End bp | 5495556 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935468 |
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| Product | F0F1 ATP synthase subunit C |
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| Protein accession | YP_001476221 |
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| Protein GI | 157377621 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01260] ATP synthase, F0 subunit c |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000555437 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000047604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAAACTG TTCTAGGCAT GACAGCTATT GCTGTTGCTC TGCTAATTGG TATGGGTGCA
CTAGGTACCG CTATCGGTTT TGGCCTGCTA GGTGGTAAGT TCTTGGAAGG CGCTGCGCGT
CAACCAGAAA TGGCTCCTAT GCTACAAGTT AAAATGTTCA TCGTTGCTGG TCTTCTTGAT
GCGGTAACTA TGATCGGTGT TGGTATTGCA TTATTCATGC TTTTCACCAA TCCACTAGGT
GCAATGCTGT AA
|
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| Protein sequence | METVLGMTAI AVALLIGMGA LGTAIGFGLL GGKFLEGAAR QPEMAPMLQV KMFIVAGLLD
AVTMIGVGIA LFMLFTNPLG AML
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