| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4487 |
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| Symbol | |
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| ID | 5612617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5491783 |
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| End bp | 5492643 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935464 |
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| Product | F0F1 ATP synthase subunit gamma |
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| Protein accession | YP_001476217 |
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| Protein GI | 157377617 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
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| TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.575584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000846989 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAACG CTAAAGAGAT TAAAACCAAG ATCGCGAGTG TTAAAAACAC TCAGAAGATC
ACGTCTGCTA TGGAAATGGT TGCCGCGAGT AAAATGCGTA AAGCACAAGA TCGCATGGCA
GCTAGTCGTC CATATGCAGA AAATATGCGT AAGGTGATCG GTCACGTGGC GCAAGGTTCT
CTCGAGTATA AACACCCCTA TTTAGAGGTG AGAGAGGCCA AGCGGGTTGG TTACATTGTT
GTATCAACCG ACCGTGGTCT TTGTGGTGGT CTGAACGTCA ACCTTTTCAA AAAGGTTGTC
GCAGACGTGA AGAGCCAGCG AGAGCAAGGC GTAGAAGTTG AATTCTGCCC CATTGGTGCT
CGCAGTGTAC AGTTCTTCAA TAGCTTCGGC GGACAGGTAT CTGCATACGC TTCAGGTTTA
GGTGATGCTC CAAAGCTCGC TGACTTGATC GGAACAGTAC GTGTCATGCT ACAAGCATAC
AACGAAGGTA AATTGGATCG TCTGTATGTA GTATTCAACA GATTTGTGAA TACTATGAGT
CAGACTCCAG TGATCGAACA GCTGCTACCG TTGCCTAAGT CTGAGGTTGA TGAGGTTTCT
CATCACTGGG ACTACCTATA CGAGCCAGAT CCAAAAGAAC TTTTGGAAAC TTTACTGGTA
CGTTATGTGG AGTCGCAGGT TTACCAAGGT GTTGTTGAGA ATCTTGCATC TGAGCAAGCA
GCCCGTATGG TTGCTATGAA ATCTGCAACT GACAACGCCG GTGATCTTAT TAGTGACTTG
CAGTTAGTCT ATAACAAGGC CCGTCAGGCT GCGATTACGC AGGAACTTTC GGAAATTGTT
GCAGGTGCTG CAGCGGTTTA G
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| Protein sequence | MANAKEIKTK IASVKNTQKI TSAMEMVAAS KMRKAQDRMA ASRPYAENMR KVIGHVAQGS
LEYKHPYLEV REAKRVGYIV VSTDRGLCGG LNVNLFKKVV ADVKSQREQG VEVEFCPIGA
RSVQFFNSFG GQVSAYASGL GDAPKLADLI GTVRVMLQAY NEGKLDRLYV VFNRFVNTMS
QTPVIEQLLP LPKSEVDEVS HHWDYLYEPD PKELLETLLV RYVESQVYQG VVENLASEQA
ARMVAMKSAT DNAGDLISDL QLVYNKARQA AITQELSEIV AGAAAV
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