| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4484 |
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| Symbol | |
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| ID | 5612656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5488320 |
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| End bp | 5489687 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935461 |
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| Product | UDP-N-acetylglucosamine pyrophosphorylase |
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| Protein accession | YP_001476214 |
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| Protein GI | 157377614 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
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| TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.150295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000109474 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATTGA ACGTAGTGAT TTTGGCCGCA GGCAAGGGAA CCCGCATGCG CTCGGAACTA
CCTAAAGTTT TACACCCTAT CGCCCATAAA AGTATGGTGC AGCATGTGAT CGACACGGCT
CATAGTGTTG GTAGTGATGC TATTCAGTTG GTGTATGGCT ACGGTGCGGA AAAGCTGCAG
AGTGTGTTGG GTGAGCAGCA ACTTAATTGG GTTCTGCAGG CTGAACAGTT AGGAACCGGC
CATGCGGTAG CTCAGGCAAA TGATAATATT GGCGACGATG ATACTGTCTT GATCCTCTAT
GGTGATGTGC CCCTTATTCA GGCTTCGACA TTAGAGGCTC TGCTTGCCGC AAGAGAAGAT
AATGGCTTGG CAATATTAAC GGTAAACTTA GCTAACCCTA TGGGCTATGG TCGTATAGTT
CGTGAGGCAA ATAAGGTCGT CGGTATCGTC GAGCAGAAAG ATGCCAGTGC AGAGCAGCTT
GCTATCAATG AGATCAATAC AGGCATAATG GCGGCACCCG GTAAGCAACT CAAAGCCTGG
CTTGGTCAGT TATCATCAGA TAACGCCCAA GGCGAGTATT ATCTTACCGA TATCGTTGCT
ATGGCCCATA AAGATGGCGT TGAGATCACG ACGGCTCAGC CTGAATCGGC TATTGAAGTT
GAGGGGGCTA ACAACCGGGT TCAGCTGGCT CAGCTTGAGC GTGCATATCA GGCTCGCGCA
GCAGAGAAGC TGATGCTCGA AGGTGCGAAT CTCAGAGACC CTGCAAGGCT GGATATTCGT
GGCGACGTCA CCGTCGGCAT GGATGTGATG ATAGATATCA ACGTCATCAT TCAGGGTAAG
GTCACCATAG GTAATAATGT GACTATCGGC GCCGGTGCAA TTCTTATCGA TTGTGAGATT
GGGGATAATG CCGAGATCAA GCCTTACTCA ATCGTTGAGA ATGCCAAATT GGGTGTTGAG
GCCAGTGCCG GACCTTTTGC ACGTCTTCGT CCGGGCGCCG AGCTAAAGCG TGATGCCCAT
ATCGGTAACT TCGTAGAGAT GAAGAAAGCT GTGTTGGGTG AGGGCTCGAA GGCGGGTCAT
CTGGCCTATA TTGGTGATGC GCAGATTGGT TGCGGCGTTA ATATTGGTGC AGGTACCATT
ACCTGTAACT ATGATGGCGC TAACAAGCAC CTTACCGTTA TCGAAGATAA TGTATTCGTG
GGTAGTGATA CTCAACTTGT GGCTCCTGTT ACTATTGGAA AGGGGGCGAC ACTCGGTGCT
GGCTCGACCA TTACCAGTAA TGTAGCCGAA GGCGAGCTGG TTATTACCCG GGTTAAACAG
CGTCACCTGA CTGGCTGGGC AAGACCGGTT AAGAAACCTA AAAGCTAA
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| Protein sequence | MALNVVILAA GKGTRMRSEL PKVLHPIAHK SMVQHVIDTA HSVGSDAIQL VYGYGAEKLQ
SVLGEQQLNW VLQAEQLGTG HAVAQANDNI GDDDTVLILY GDVPLIQAST LEALLAARED
NGLAILTVNL ANPMGYGRIV REANKVVGIV EQKDASAEQL AINEINTGIM AAPGKQLKAW
LGQLSSDNAQ GEYYLTDIVA MAHKDGVEIT TAQPESAIEV EGANNRVQLA QLERAYQARA
AEKLMLEGAN LRDPARLDIR GDVTVGMDVM IDINVIIQGK VTIGNNVTIG AGAILIDCEI
GDNAEIKPYS IVENAKLGVE ASAGPFARLR PGAELKRDAH IGNFVEMKKA VLGEGSKAGH
LAYIGDAQIG CGVNIGAGTI TCNYDGANKH LTVIEDNVFV GSDTQLVAPV TIGKGATLGA
GSTITSNVAE GELVITRVKQ RHLTGWARPV KKPKS
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