Gene Ssed_4475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4475 
Symbol 
ID5612865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5464196 
End bp5464447 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content46% 
IMG OID640935445 
Producthypothetical protein 
Protein accessionYP_001476205 
Protein GI157377605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000150782 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000228641 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGATTGTC GTCTTGGCTG TGGAGCGTGT TGTATCGCCC CCTCAATAAC TAGCCCTATT 
CCAGGTATGC CTGAAGGAAA GGCCGCTGGT GAACGTTGTG TTCAGTTATC CGAAGACAAT
CTGTGCAAAA TCTTTGGCAG CAAGGAACGT CCGGATGTAT GTAGCTCTTT TTCTGCTACT
TTTGACGTCT GTGGTAATAG CAACAATGAA GCGCTTAGGC TGATTGCTTT TTTAGAGTCA
CAAACCAGCT AA
 
Protein sequence
MDCRLGCGAC CIAPSITSPI PGMPEGKAAG ERCVQLSEDN LCKIFGSKER PDVCSSFSAT 
FDVCGNSNNE ALRLIAFLES QTS