| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4471 |
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| Symbol | |
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| ID | 5613153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5460480 |
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| End bp | 5461613 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935441 |
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| Product | peptidase M23B |
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| Protein accession | YP_001476201 |
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| Protein GI | 157377601 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG4942] Membrane-bound metallopeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.211003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000159575 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAATATTC GCTTTTTTAT TAAAGCCAGC ATTATTGCTG GCTTTATCAT ACTTTCATCT
TATGTTCAGG CATCTGATCT GCAGCAACGT CAATCCGATC TGAAATCACT TCAATCTCAG
ATAAGTAAAC AAGAGTCTGC ACTCCAAGAC ACCAACAAAC AGCGTGAACA GCTCATCTCT
CTGCTAAAAA AAGATGAAAA AGCGATTGCT ACAGCAGCTC GAAAAGTTAA TGAAACCAAA
GTCGCGTTAG CCGAAACAGA TAAAAGTCTG CATACACTAA AGCAACGCCA AGATAAATTG
GATGCATTGA AACAAACTCA ACAAGATACA CTTTCTAACC AGCTGGCGAG TGCATACTTA
GCAGGTAATC ACGATTACAG TAAGATGCTG CTAAATCAGC AGAGTCCAGC AACCATTGAA
CGCCTCCTTG CCTACTATCA ATACCTGAAT AATGCTCGTA TGAAGTCCAT CAATGAACTT
CAGGGCACTA TGTCGGAGCT CGATGAGATA CAAGACAAAC AGGTAAAGCA GAAAAATAAA
CTCAATAAGT TAGTCCTCAA TCAACAACAG CACTCTAAAC AGCTCAGCCT TGAACAGAGT
CAACGCCAGA GCACGCTTAC CCAGCTCCAA AGAACGGTCA ATAGCCGTGG TGCCAAGCTT
GAACAGCTGC AAATTGAGGA GGCGAGCCTC AAGCGCATCG TGGAACAAGC CTTATTAGCC
ACAAACAACA GTCCCAGCAT GGAAGGGCTA AAGAGTAAAA ATAAACTCAA ATGGCCGACT
AAGGGACGCA TAAGATCCGG GTTTGGCAGC AAGCGTTCCG GCCAGGTCAA ATGGAAAGGG
GTAACCCTTG CAGCCCCTGA AGGACAACAA GTATCCTCCA TCGCTGCCGG TAAAATCATT
TATGCCGATT GGTTAAGAGG TTTTGGTATG GTGTTAGTTG TCGATCACGG CAAGGGGTAT
ATGAGCTTAT ATGGTCATGC CCAAACACTT TTAAAGAATG CCGGAGACAC TGTAAACAAA
GGGGAAACGA TTGCACTCGT CGGACGTTCG GGTGGACAGA CTGAGGCTGG CCTATACTTT
GAGGTAAGGC ATAAAGGGCA AGCGGTCGAT CCAGCGAGAT ATTGTAAACG CTAG
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| Protein sequence | MNIRFFIKAS IIAGFIILSS YVQASDLQQR QSDLKSLQSQ ISKQESALQD TNKQREQLIS
LLKKDEKAIA TAARKVNETK VALAETDKSL HTLKQRQDKL DALKQTQQDT LSNQLASAYL
AGNHDYSKML LNQQSPATIE RLLAYYQYLN NARMKSINEL QGTMSELDEI QDKQVKQKNK
LNKLVLNQQQ HSKQLSLEQS QRQSTLTQLQ RTVNSRGAKL EQLQIEEASL KRIVEQALLA
TNNSPSMEGL KSKNKLKWPT KGRIRSGFGS KRSGQVKWKG VTLAAPEGQQ VSSIAAGKII
YADWLRGFGM VLVVDHGKGY MSLYGHAQTL LKNAGDTVNK GETIALVGRS GGQTEAGLYF
EVRHKGQAVD PARYCKR
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