Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4470 |
Symbol | |
ID | 5613152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 5458925 |
End bp | 5460469 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640935440 |
Product | phosphoglyceromutase |
Protein accession | YP_001476200 |
Protein GI | 157377600 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0696] Phosphoglyceromutase |
TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000756408 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTACAC GCAAACGCCC CTTGGCATTG CTGATCCTCG ATGGCTGGGG TTACCGTGAA AACACGCAAA AAAATGCGGT ATACCACGCT AACACTCCAG TATTGGATCG ACTCAACGCC CAATATCCAA ACAGCTTGAT TTCCGGCTCT GGCTTAGATG TCGGTTTACC CGATGGTCAG ATGGGCAACT CAGAAGTTGG TCATATCAAT ATCGGCTCAG GTCGCATTGT CTATCAAGAA CTTACCCGTA TTGGTAAAGC GATTGAAGAT GGTGAATTTG ATAAAAATCA GGCCTTAGTC GAGTCCATAG ATAAGGCCAT CGCTAACCAA GGTGCTGTAC ACATTATGGG GCTACTTTCC CCGGGTGGTG TACATAGTCA CGAAAGCCAC ATTGAAGCCA TGTGTCGACT CGCTGTAGCA CGTGGAGCCA AGCAGGTTTA CCTGCATGCA TTTCTCGATG GACGTGACAC TCCTCCCCGT AGTGCGAAGG GCAGCTTAGC TCATTTTGAT GATCTGTTTA CTACATTAGG CACTGGTCGC GTCGCCTCGG TCATAGGCCG TTACTATGCA ATGGATCGTG ATAACCGCTG GGATCGTGTG TCTCAAGCCT ACGAGCTTAT TACCGAAGGT AAGTCATTAC ATCAGTACTC TAACGCCGTA GAAGCACTCG AGGCAGCCTA TGCTCGTGAC GAAAATGATG AGTTCGTCGG CAGCTCTGCC ATCCTTGACG CTCAAGGAGA TAGTGCTCAG CTAGCAGATG GCGATGCGCT GATCTTTATG AACTTCCGCG CAGACAGAGC CCGTCAAATC ACTCGCAGTT TTGTTGATGC TGACTTCGAC GGCTTCGAGC GTAACGTTAC GCCAAAAGCT CATTTTGTCA TGCTGACTGA GTACGCCGCC GACATTAAAG CCGCCATCGC CTACCCATCG ACAAATTTGG TTAATACCTT AGGTGAAGCG CTTCAAGACA GCGATAAGAC TCAGCTTCGT ATTTCTGAAA CTGAAAAGTA CGCTCATGTG ACCTTCTTCT TTAACGGCGG GAAGGAAGAG CCATTTAAAG GTGAAGATCG AATATTAATA CAATCACCAA AAGTGGCTAC CTACGACCTT CAGCCAGAGA TGAGCTCTGC AGAGTTAACC GACAAGTTGG TTGAGGCGAT CGAGTCAACA AAATATGATG TCATTATCTG TAACTACCCT AATGGCGATA TGGTTGGCCA TACCGGTAGC TTCGATGCGG CAGTTAAAGC CTGTGAAGCC GTGGATACTT GTATCGGCCG TGTAGTCGAT GCACTAGCAA AAGTTGATGG TGAATGCTTA ATCACAGCCG ATCATGGTAA TGCCGAGCAG ATGACCGATG AACAGACGGG TCAGGCACAC ACGGCTCATA CCAGTGAATT AGTCCCGTTA ATCTATGTCG GACGTAACGG CAGCATAGAA AATGATGGAC GATTAAGCGA TCTTGCCCCA ACCATGTTAA CCTTGATGGG AGAAGAAGTG CCGTCAGAGA TGACTGGACG CTCAATAATT AAACTCGATG AGTAA
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Protein sequence | MTTRKRPLAL LILDGWGYRE NTQKNAVYHA NTPVLDRLNA QYPNSLISGS GLDVGLPDGQ MGNSEVGHIN IGSGRIVYQE LTRIGKAIED GEFDKNQALV ESIDKAIANQ GAVHIMGLLS PGGVHSHESH IEAMCRLAVA RGAKQVYLHA FLDGRDTPPR SAKGSLAHFD DLFTTLGTGR VASVIGRYYA MDRDNRWDRV SQAYELITEG KSLHQYSNAV EALEAAYARD ENDEFVGSSA ILDAQGDSAQ LADGDALIFM NFRADRARQI TRSFVDADFD GFERNVTPKA HFVMLTEYAA DIKAAIAYPS TNLVNTLGEA LQDSDKTQLR ISETEKYAHV TFFFNGGKEE PFKGEDRILI QSPKVATYDL QPEMSSAELT DKLVEAIEST KYDVIICNYP NGDMVGHTGS FDAAVKACEA VDTCIGRVVD ALAKVDGECL ITADHGNAEQ MTDEQTGQAH TAHTSELVPL IYVGRNGSIE NDGRLSDLAP TMLTLMGEEV PSEMTGRSII KLDE
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