| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4468 |
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| Symbol | |
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| ID | 5613006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5457533 |
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| End bp | 5458021 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640935438 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | YP_001476198 |
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| Protein GI | 157377598 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00890854 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGAAG TAGCAAACAA CGAACAACAA GAACCACAGT TCAACATTCA ACGTGTTTAC
ACGAAAGATA TCTCTTTCGA AACGCCAAAC AGCCCTGCAG TGTTCCAGAA AGAGTGGAAT
CCAGAAGTTA AGCTAGATCT TGATACTCGT AGCGCTAAGC TTGCTGACAA CGTATTTGAA
GTTGTATTGT CTCTGACAGT AACAGCTAAA AACGGTGAAG AAACTGCTTT CCTATGTGAA
GTTCAGCAAG CTGGTATCTT CGCTATCAAT GGTCTTACAG AGCAGCAACT TGCTCACTCT
CTAGGTGCAT ACTGCCCTAA CATCCTTTTC CCATATGCTC GTGAAACTGT AGGCAGCTTA
GTTGGACGTG GTACTTTCCC ACAACTAAAC CTAGCTCCAG TAAACTTTGA TGCATTGTTC
GCTCAATATG TTAACCAGCG TCAAGAAGGT GCAGAAGAAG CTGCTCAAAC TGAAGAAGCA
AGCGCTTAA
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| Protein sequence | MAEVANNEQQ EPQFNIQRVY TKDISFETPN SPAVFQKEWN PEVKLDLDTR SAKLADNVFE
VVLSLTVTAK NGEETAFLCE VQQAGIFAIN GLTEQQLAHS LGAYCPNILF PYARETVGSL
VGRGTFPQLN LAPVNFDALF AQYVNQRQEG AEEAAQTEEA SA
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