| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4452 |
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| Symbol | |
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| ID | 5613424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5440024 |
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| End bp | 5441208 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935422 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476182 |
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| Protein GI | 157377582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAA ATACCGTTTA TATTATTGCT TTGTCTATAT CAGGTCTGCT GTTCAGCCCT
AAGATTTTTG CTGAAAATTC TGCGGCGAAT GTCCACCTGA GTCAGGTGGA GAAGCTCATT
GTTTCATCGG AGCAGTTTAA GGAGTCCGCC GAATTTATCG TTACCTTGCC GCCGAGTTAT
AGCAAGAACA GTGATAAAGA GTATGTGCTT CTGTTGGACT TTCATCCTCG CAGCCAAGCC
TACCTTAGCG GTATGCATGA CTGGATGAGC CATAACGGCG ATTGGCCTTG GCTGAAAACC
ATTATCGTAA CAGCGCCCGA TGGGCACAAA GGACTGGGTC TGTTGAAGGT GCAAGCTATC
GAAGAGCAGG GCAGTGAACT GTTGTTGGAT TTTATGGAGC AAGAGCTGCT CCCGGCAATT
GACAGCAAGT ACCGAACCAA TGGCTTTCGT ATCCTCAACG GTTTTACCGG CAATGCAGGC
TTAAGTCTCT ACACCCTGCT CAATCGTCCC GGCCTCTTTA ATGCCTATTT TGCCGCCAGT
CCGGTACTGA GCAAAGACTT TGCCTATGTC ATCAAGGATG CCCCCAAGAA ACTCGCCGCC
ATGAAAGGCA AGCCAAGGTT TCTGCTGATG AGCACCAGTG ACAGCGGCTT CGAGAAGAGG
CAATTAGCCA GCTTTGCTGA GATGGAATCA ATCATAGAGG CGAATGCCAC ATCGAAACTG
GATTACCACA TTAAACGCTT CGACGGCACC TACTATATGA CTCAACCTAT ATTGGCAACC
GCCTATGGTA TAGAGCTGCT GTTTAATGAT GTTCATCGGG TGTTAAAGCC AGATTCCGAG
ATCTCAAGCC AAGGTGCGCA GGCGATACTG GCACACTACC GTTATCTGTC TGAGGAGAAG
TACGGTTTCG AGGTGCCCGC CACCGACTCC CTGATAGCCC TGGCCAAAGC CGAGTCGACC
AAGGATGCAG CAAAAGGGTT GGCTGTTTAC CAGATTGCAG TGAAGGCTGC GCCCGACTCA
CACACGGCCC ATGACGCATT GGCGAACGCC TATGCAGAGG CTGGAGAGTT TGAGTTAGCC
ATCAAACATG AGCAACTTGC GTTGAATAAC ACCGAGCATC CATTCTGGAC CAAGAGGTAC
TCAGAGAGTC TGGCCGCTTT TGAGGCTAAA AAGGGTGTTC TATAA
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| Protein sequence | MLRNTVYIIA LSISGLLFSP KIFAENSAAN VHLSQVEKLI VSSEQFKESA EFIVTLPPSY
SKNSDKEYVL LLDFHPRSQA YLSGMHDWMS HNGDWPWLKT IIVTAPDGHK GLGLLKVQAI
EEQGSELLLD FMEQELLPAI DSKYRTNGFR ILNGFTGNAG LSLYTLLNRP GLFNAYFAAS
PVLSKDFAYV IKDAPKKLAA MKGKPRFLLM STSDSGFEKR QLASFAEMES IIEANATSKL
DYHIKRFDGT YYMTQPILAT AYGIELLFND VHRVLKPDSE ISSQGAQAIL AHYRYLSEEK
YGFEVPATDS LIALAKAEST KDAAKGLAVY QIAVKAAPDS HTAHDALANA YAEAGEFELA
IKHEQLALNN TEHPFWTKRY SESLAAFEAK KGVL
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