Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4449 |
Symbol | |
ID | 5610915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 5436144 |
End bp | 5437370 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640935419 |
Product | imidazolonepropionase |
Protein accession | YP_001476179 |
Protein GI | 157377579 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | [TIGR01224] imidazolonepropionase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTGGG ATCAGGTCTG GATTGACGTC AACGTAGCGA CAATGTCTCC TTCTGTATCA GCGCCTTACG GAGCGATAAC CGATGCAGCT GTTGCGGTAG AAAAAGGCCG AATTGCCTGG ATTGGCCTCC GTTCCGAGCT GCCCGAATTC GATGTTCTGT CAACACCGGT TTACAGGGGG AAAGGCGCCT GGATAACCCC GGGCCTTATC GACGCTCACA CCCATTTAGT GTTCGCCGGT AACCGGGCCA ACGAGTTTGA GCTTCGCCTG CAGGGCGCCA GCTATGAAGA GATTGCCCGT AGCGGCGGTG GCATCATCTC CACCGTTAAA GCCTGCCGTG AAGCCAGCGA AGGCGAGCTC TTTGAGCTGG GCCGAAAACG TCTCAACGCC CTGGCGAAAG AGGGCGTGAC CACGGTCGAG ATAAAATCCG GCTATGGCCT GGAAACAGAG ACAGAACTCA AACTGCTGCG CGTCGCCCGC GAGCTCGGTA AGCATCATCA CGTCGATGTG AAAACCACCT TCTTAGGGGC TCATGCCATA CCGCCAGAGT ATAAAGACAA CGCAGAAACC TATGTGGACT TAGTGATTGA CGAAATGCTG CCCGCCGTTA TCGAGGAAAA CCTTGCCGAT GCGGCCGACG TCTTCTGTGA AAATATCGCC TTCAGTGTCG AGCAGACCGA GCGGGTATTA ACCGCAGCCA AAGATGCCGG GCTCGATATC AAGCTTCACG CCGAGCAACT CTCTAATCTG GGAGGTTCGG CTATGGCCGC CAGGCTAGGC GCCAAATCGG TGGATCATAT CGAATACCTG GACGAGACCG GAGTAAAAGC CCTGAGTCAA AGTGGCACCT GCGCCACCCT GCTCCCCGGT GCCTTCTACT TTCTGCGTGA GACTCAGATG CCACCGATTG AGCTGCTGCG TAAGCATAAG GTACCCATGG TTCTGGCCAG TGACTACAAC CCGGGATCGT CGCCGCTCTG CTCGAGTCTG TTAATGCTCA ACATGGGCTG CACCCTGTTC CGCCTGACAC CAGAGGAGGC GCTTGCGGGT ATGACACGCA ATGCCGCCAA GGCATTAGGG GTAGAGGACA ACGTAGGTGT CCTTGAAGTT GGGATGCAGG CTGATTTCTG TTTGTGGGAT ATCACTACAC CGGCTCAGCT TTCCTACTCA TATGGCGTAG GTGTGTGCCT TGAGGTGGTC AAATCAGGAC AATTGGTACA CCAGTAA
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Protein sequence | MSWDQVWIDV NVATMSPSVS APYGAITDAA VAVEKGRIAW IGLRSELPEF DVLSTPVYRG KGAWITPGLI DAHTHLVFAG NRANEFELRL QGASYEEIAR SGGGIISTVK ACREASEGEL FELGRKRLNA LAKEGVTTVE IKSGYGLETE TELKLLRVAR ELGKHHHVDV KTTFLGAHAI PPEYKDNAET YVDLVIDEML PAVIEENLAD AADVFCENIA FSVEQTERVL TAAKDAGLDI KLHAEQLSNL GGSAMAARLG AKSVDHIEYL DETGVKALSQ SGTCATLLPG AFYFLRETQM PPIELLRKHK VPMVLASDYN PGSSPLCSSL LMLNMGCTLF RLTPEEALAG MTRNAAKALG VEDNVGVLEV GMQADFCLWD ITTPAQLSYS YGVGVCLEVV KSGQLVHQ
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