| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4437 |
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| Symbol | |
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| ID | 5609944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5424546 |
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| End bp | 5425307 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935407 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476167 |
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| Protein GI | 157377567 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3332] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.120022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCATTC TCTTTATTGC CCTGAATCAA CACCCCGAGT ATCCCTTGAT AGTCTGTGCC
AACAGAGATG AGTTTCATCA CCGTCCCACC GAGCCTGCCC ATTTCTGGAA ACCTGACAAT
GAACTGTTAG CGGGTAAAGA TCTTGAAGCG GGTGGTAGCT GGTTCGGGAT CAACAAGGAG
GGTGACTTTT CGGCCCTGAC CAACCTGCGC AACCCGATGA ATCAAAAGAG TAATATGAGA
AGCCGTGGCG AGTTAGTGCT TAAGGCACTT AAACGATATG AGCCGCTCAC GGTGAGCTGG
CTTAGAGAGC ACAGTGAAAA CTACAACCCT TTCAACTTAA TCTTCGGCCA TGCCGATGAG
CTTTACTGCT TCAACAGCAC CGCGAAAGAT CTGACTCTGT TAACCCCGGG CTTTCACTCG
ATCAGCAACG GGGCTCTGGA TGATATCTGG CCCAAGATGG CAAGGGGAAG CCTGGCACTG
GAGAAGCTGA TCACCGAATC GGCAGAGCCC GATATTGATG AGTTAATCAG CATCATGAAG
GATGAAACCC GGGCCGGCGA TTTGGATCTA CCCCAAACCG GCATAGGCGT CGAATGGGAG
CGACTCCTCT CTTCAATATT TATTCGCCAC GAAGAGTACG GCACCCGCTC CACCAGCATC
ATATTGCAGG ATAAGCAGGG CAAGACCCGC TTCATCGAAG TCAGATATGA CGGCAAAGGC
AGAAACCTTG GCCGTCAGGT GTTTACGGTT GAACCGGCTT AA
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| Protein sequence | MCILFIALNQ HPEYPLIVCA NRDEFHHRPT EPAHFWKPDN ELLAGKDLEA GGSWFGINKE
GDFSALTNLR NPMNQKSNMR SRGELVLKAL KRYEPLTVSW LREHSENYNP FNLIFGHADE
LYCFNSTAKD LTLLTPGFHS ISNGALDDIW PKMARGSLAL EKLITESAEP DIDELISIMK
DETRAGDLDL PQTGIGVEWE RLLSSIFIRH EEYGTRSTSI ILQDKQGKTR FIEVRYDGKG
RNLGRQVFTV EPA
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