| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4435 |
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| Symbol | |
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| ID | 5609942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5421963 |
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| End bp | 5422568 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935405 |
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| Product | multiple antibiotic resistance (MarC)-related protein |
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| Protein accession | YP_001476165 |
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| Protein GI | 157377565 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000587545 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATATCT TTTCCGCCGC AGTTATGTTG TTTCTTATCA TGGATCCCTT GGGGAATCTA
CCTATTTTTG CGTCGATACT GCGTCATATT GAGCCCAAGA AACGCCGTAG GGTACTGATC
AGAGAGCTGG TATTTGCACT CGTGATTATG CTGTTATTTC TGTTTGCCGG TGAAGCCATT
CTAAACTTCC TTAACTTAAA ATCTGAGTCG GTGAGTATTG CCGGTGGTAT TATTTTGTTC
CTCATTGCGA TAAGAATGAT CTTTCCCCAG CCGGGTGGTG TCGTTGGATT GGCGGCGGGT
GAAGAGCCCT TTATCGTGCC CATGGCCATC CCCTTGATGG CTGGCCCCTC GGTGTTAGCC
GCACTGATCC TGTTAGCTCA TACAGACAGC TCCCGTATGA TGGACTGGAC CATAGCCCTG
CTGGCTGCAT GGGGTGCGAG TGCCGTCATT CTACTCTTCT ATAAAGTATT CACTAAGGTA
CTCGGAGAGA AGGGACTTAC GGCGGTCGAA CGCCTGATGG GTATGGTACT CGTGATGATT
TCGGTACAGA TGTTCCTCGA TGGCATTGCA GATTATATGT CCCACATAGG CCAGGCTGTT
CCGTAA
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| Protein sequence | MDIFSAAVML FLIMDPLGNL PIFASILRHI EPKKRRRVLI RELVFALVIM LLFLFAGEAI
LNFLNLKSES VSIAGGIILF LIAIRMIFPQ PGGVVGLAAG EEPFIVPMAI PLMAGPSVLA
ALILLAHTDS SRMMDWTIAL LAAWGASAVI LLFYKVFTKV LGEKGLTAVE RLMGMVLVMI
SVQMFLDGIA DYMSHIGQAV P
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