Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4433 |
Symbol | |
ID | 5609641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 5418883 |
End bp | 5419206 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640935403 |
Product | hypothetical protein |
Protein accession | YP_001476163 |
Protein GI | 157377563 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00983616 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCG TCCTCTCTTT GTGCGTCTCC ATCATTTCAG TCGCCCTGTT GTCAGGCACG CTTACGGCCT GTGCTTCTGG GCTTGACGAC AGGAGTTCGG CGGCTAATGA CACGCTATCT GATGCGCCTG CTAATAATCT GAAACAGATA TCCCCCTGTG GCGCCATGCC GCCCATTAAA GATCGGTCTA AACTTAAACA AAGCCTACTG GAAAGGGGGC TGATAAAAGA AGAGATGAGC CTTGATGAGG CCGACAGAAT CGTTGCCGAA TATATCAATA AAAGACAGCA AGCCTTCGAG GATTGCCCGA AGAAGAGAAA GTGA
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Protein sequence | MKTVLSLCVS IISVALLSGT LTACASGLDD RSSAANDTLS DAPANNLKQI SPCGAMPPIK DRSKLKQSLL ERGLIKEEMS LDEADRIVAE YINKRQQAFE DCPKKRK
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