Gene Ssed_4433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4433 
Symbol 
ID5609641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5418883 
End bp5419206 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content49% 
IMG OID640935403 
Producthypothetical protein 
Protein accessionYP_001476163 
Protein GI157377563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00983616 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG TCCTCTCTTT GTGCGTCTCC ATCATTTCAG TCGCCCTGTT GTCAGGCACG 
CTTACGGCCT GTGCTTCTGG GCTTGACGAC AGGAGTTCGG CGGCTAATGA CACGCTATCT
GATGCGCCTG CTAATAATCT GAAACAGATA TCCCCCTGTG GCGCCATGCC GCCCATTAAA
GATCGGTCTA AACTTAAACA AAGCCTACTG GAAAGGGGGC TGATAAAAGA AGAGATGAGC
CTTGATGAGG CCGACAGAAT CGTTGCCGAA TATATCAATA AAAGACAGCA AGCCTTCGAG
GATTGCCCGA AGAAGAGAAA GTGA
 
Protein sequence
MKTVLSLCVS IISVALLSGT LTACASGLDD RSSAANDTLS DAPANNLKQI SPCGAMPPIK 
DRSKLKQSLL ERGLIKEEMS LDEADRIVAE YINKRQQAFE DCPKKRK