| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4429 |
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| Symbol | |
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| ID | 5611665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5413578 |
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| End bp | 5414792 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935399 |
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| Product | putative SAM-dependent methyltransferase |
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| Protein accession | YP_001476159 |
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| Protein GI | 157377559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3129] Predicted SAM-dependent methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000747562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGC ACTCTCAAAA ACAGAACCGC CAGAAACAGA CAACTCAGAA GCAGACCCGA
CGAAAAAAGC CAGCAGGCAA GCTGAAAGCT AAGTCTGAAG CAAAGCTCGA TACAAGAGGC
AAGCCCGAAA CGACAGAGAA GAAAGGCCTC CATGAGCGAA ACCTGCATAG GGACGGCTAT
GATTTTGAAC AGCTGATTGA GGCATCACCG GCGTTAAAAC CTTATGTCAG ACCGAATCCA
TACGGTAACC TTTCGATAGA TTTCGCCGAT CCCTTAGCCG TTAAGGCATT GAACCTGGCC
CTGCTGCAAC TTCACTACCG GATTGAGTAT TGGGATATCC CGGCAGGATT TCTCTGTCCT
CCGATCCCCG GTCGGGTCGA TTACCTTCAC TATATTGCCG ATCTGTTGGC CGGAATTGAC
TCGGACACGG TTGGGGATAA AGCAGAGGAG CAGGTTGAGG AGATAGGGAC TAGACAAAAT
GTCCCATACG CTTCTAAACC AGAATCTTCA GCGCCTAAGC AGAGGTATAA GTCTCAGAAA
AGAATGAAGA TTAATGCCCT GGATATCGGT ACCGGTGCCA ATGGCATCTA CCCGATACTC
GGCATTCAAG CCTACGGCTG GCGGTTTGTC GCCAGCGATG TAGACCCGCT GTCGATAGAG
AACGTTAATC GGATTGTCGG GCAAAACAAG GCCTTGCAAG GCAAGTTAAA GACACGGCTG
CAAACCGATC ATCAAAAAGT GTTTCATGGC ATCATTCAAG CAGACGACCG ATTCGATATC
ACCCTCTGTA ACCCGCCATT TCACGCATCA TTGAGTGAGG CGAGCGAAGG TAGCCTTCGT
AAGGTGAAGA ACTTAGCGGC TAACCGAGCG GCGAAAGGAC ATAAGCCTGA GCCTGCAGCT
AGTAAGGCTA AACCTGATGC CAATGAGCTT AACTTCGGTG GCCAGAAGGC CGAGCTTTGG
TGCGAGGGCG GCGAGAAGCA GTTTCTCGCT AACATGATCC GCGAGAGTAA AGATTTCGCC
ACTCAATGTT TGTGGTTCAC CAGCCTGGTG TCCAAGAAAG AGAATCTGCA GCCTTGCTAC
GCCGCACTGG AAAAGGTGGG GGCGGTGACG GTGAAGACCA TAGATATGGC ACAAGGTAAT
AAGCTTACAC GGGTTTTGGC CTGGAGTTAT CTCACGCCTA AGCAGCAGGC GCTCTGGGCT
AAGTATCGTT CTTAG
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| Protein sequence | MTKHSQKQNR QKQTTQKQTR RKKPAGKLKA KSEAKLDTRG KPETTEKKGL HERNLHRDGY
DFEQLIEASP ALKPYVRPNP YGNLSIDFAD PLAVKALNLA LLQLHYRIEY WDIPAGFLCP
PIPGRVDYLH YIADLLAGID SDTVGDKAEE QVEEIGTRQN VPYASKPESS APKQRYKSQK
RMKINALDIG TGANGIYPIL GIQAYGWRFV ASDVDPLSIE NVNRIVGQNK ALQGKLKTRL
QTDHQKVFHG IIQADDRFDI TLCNPPFHAS LSEASEGSLR KVKNLAANRA AKGHKPEPAA
SKAKPDANEL NFGGQKAELW CEGGEKQFLA NMIRESKDFA TQCLWFTSLV SKKENLQPCY
AALEKVGAVT VKTIDMAQGN KLTRVLAWSY LTPKQQALWA KYRS
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