| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4424 |
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| Symbol | |
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| ID | 5612306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5407243 |
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| End bp | 5408934 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935394 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001476154 |
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| Protein GI | 157377554 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAAAA ATTTGAATAA TGATAGCCAG GTTGAACTCA AAGCAGTTCG ACAGCAGGTG
TTGGCCAATA CTCAGATCCT TCAGAATCTG ATCCCGCCGA CCGTAAGTTA TACCACCGAA
GGGAATGTAC TAATCATAGG GCCGGAAGAT CTGGCCCGTT TAGCGGCGGA CAAATTGTCT
AATATGGGCA AGCTTGCCAT CTTGGCCAAT GAGTCTATTA CCAGCCAGGA TGAAGCGCAC
CTCGAAAAGG TAATGAGCTC GGCAGAAAAT GTTGAGAGCT TTTACAATAA ACTCATTGAG
ATTAAAGGCT TCCTCGGCCA GTTTCAGGTT AAGGTCGACT CAGGTTCAGA CGATGCTTCT
GATACCAATG CCGTTGAACT TAGCATGGTG GCGATACGTA AAGCCCACTT CGATCTTATC
CTGGATTTGA GTCAATCGCC TTGTATCAAC CTTGAGATGC TACCACCTGG CTACTTCTAC
GTCGGGCAGG ATGAGGCTAA GTTAGCCGAT GCCATCACCC AACTCCCCGA TCTGGTAGGC
GAGTTTGATA AGCCACGCTA CGTTAAGGTC AATAGTGAGA TCTGTGCTCA CAACCGTAAT
GGTATTGATG GTTGCAACCG CTGCCTGAAC TTCTGTCCTG CCGATGCGAT TCAAAGTATC
GACAAGATGA TCACCATCGA CCCTTATCTT TGTCACGGTG CAGGTAGTTG TACCAATGCA
TGTCCAACCG GCGCCATCAG TTATGATCTG CCAACACCGC AAGCCCTGCA CTCTTATCTG
CATAAGCTAG TGACTCGTTT TCGTGAGCAA GCGCAAACAG CACCGGTTAT CCTTTTCCAT
GATGAAGCGA ACGGTGCAGC ACTCGTCGGT GCCGATCTAT CGGGAGACGT CATTCCGGTT
GCTCTGGAAG AGATAACGGT TGCAAGCATG GATCACTGGA TGTCATCGCT TGCCTGGGGA
GCACGTCAAA TTTTGGTGTT AAACACCGAA GCGACGGCGC CGACTCTGAC GCAGATGCTG
CAAGGTGAAC ACAAATTAGC AAACGATATC TTAGATGAGA TGGGCCAACC ACAGCGTATC
TCAGTTATCG ACGAGTCGAG CATAGGCGAC CTTGCCGCAC TGCTGGAAAC CAGTTCGAAC
TGGCCAGTGA TTGTTCCCGG TGAGTTTGCT GCCACGACAA AGCGTAACAC CTTGTATGCG
GCGATTGACC ATCTCAATGA GCAGGCGGCA TCAGTGGATA CCTGCTTGAG CCAAAGCAAT
ATCCCTTACG GCATAGTCAG CATCAACAGC GACAAATGTA CTTTATGTCT CTCTTGTGTT
TCAACCTGTC CGACTCAGGC ATTAACCGAT GGTGGTGATA AACCTGCGTT ACATTTCGTT
GAGCAAGATT GTGTGCAATG TGGTCTGTGC GAGTCGGCTT GTCCCGAGAA GGTGATCAGC
CTGACACCGC AAATGAATTT TGATAAAGCG CAGCGTCAGC AGCGTCAAAC CTTGAAAGAG
GAAGCCCCAT TCGATTGTAT TCGTTGCGGT ACCCCTTTCG CCACCCAATC CATGGTGCAA
CGGATGCTGG AAGCAGTCGG AGGCCACAGT GCCTTTAGCG ATAACATCGA GCGATTAAAG
ATGTGTAGCG ACTGCCGGGT AAAAGATATG TTTGAAGACA TCCTTCAAGA TCCTGAAAAG
CAACTGCGAT AA
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| Protein sequence | MSKNLNNDSQ VELKAVRQQV LANTQILQNL IPPTVSYTTE GNVLIIGPED LARLAADKLS
NMGKLAILAN ESITSQDEAH LEKVMSSAEN VESFYNKLIE IKGFLGQFQV KVDSGSDDAS
DTNAVELSMV AIRKAHFDLI LDLSQSPCIN LEMLPPGYFY VGQDEAKLAD AITQLPDLVG
EFDKPRYVKV NSEICAHNRN GIDGCNRCLN FCPADAIQSI DKMITIDPYL CHGAGSCTNA
CPTGAISYDL PTPQALHSYL HKLVTRFREQ AQTAPVILFH DEANGAALVG ADLSGDVIPV
ALEEITVASM DHWMSSLAWG ARQILVLNTE ATAPTLTQML QGEHKLANDI LDEMGQPQRI
SVIDESSIGD LAALLETSSN WPVIVPGEFA ATTKRNTLYA AIDHLNEQAA SVDTCLSQSN
IPYGIVSINS DKCTLCLSCV STCPTQALTD GGDKPALHFV EQDCVQCGLC ESACPEKVIS
LTPQMNFDKA QRQQRQTLKE EAPFDCIRCG TPFATQSMVQ RMLEAVGGHS AFSDNIERLK
MCSDCRVKDM FEDILQDPEK QLR
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