| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4421 |
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| Symbol | |
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| ID | 5610523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5403267 |
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| End bp | 5406116 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935391 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_001476151 |
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| Protein GI | 157377551 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTAA CCCGCAAAAC AGACCAGGCT GAAGTCGCTA AAAAGCCAGC CCTAGGTCTA
AACCGTCGTC AGTTCCTTCA GTCTGCAGGT CTTGCAACTG GTGGTATTGC TGCGGCATCA
ATGCTTGGCG CAGGAATGAT GCGTAAAGCT GAAGCTAAAG AAGTACCCCA TAATGCGCCA
ACTGAAATTA AGCGTACTAT CTGTTCTCAC TGTTCAGTAG GTTGTGGTAT CTACGCCGAA
GTACAAAATG GTGTCTGGAC AGGTCAAGAG CCTGCATTCG ATCACCCATT CAACGCCGGT
GGTCACTGTG CCAAAGGTGC TGCCCTGCGT GAGCATGGCC ATGGTGAGAA ACGTCTTAAG
TATCCAATGA AGCTGGAAGG CGGAAAGTGG AAGAAGATCT CTTGGGATCA GGCGATTGAA
GAAGTCGGTG GAAAGGCATT GGATATCCGT AAGGAATCTG GTCCTGATTC AGTATTCTTC
ATGGGTAGTG CTAAGTTCTC AAACGAACAA GCGTATATGT ACCGTAAATT CGCAGCGATG
TGGGGCACGA ACAATGTCGA TCACTCAGCG CGTATTTGTC ACTCTACCAC TGTAGCCGGT
GTTGCTAACA CTTGGGGCTA TGGTGCGCAA ACTAACTCTT TCAACGATAT CCGCAACGCA
AAAGCGATGA TGTTCATCGG GTCTAACCCA TGTGAAGCGC ATCCGGTTGC TATGCAGCAC
ATCCTTGAAG GTAAAGAACG CGGTGCGAAA ATCATCGTCG TTGACCCTCG TTTCACCCGT
ACCGCAGCTA AGTCTGATGA GTTTGTACAT ATCCGTCCGG GTACTGATAT CCCATACATC
TATGGTCTGC TTTGGCATAT CTTCGAGAAC AAATGGGAAG ATCAAACCTT CATCGACCAG
CGTGTATACG GCATGGAACG TATTCGCGAG GAAGCCGCTA AGTGGAATCC TGCCGAAGTT
GAAAACGTGG TTGGTGTACC TAAAGAACAG ATGTACCGTG TCGCTAAGAC ATTGGCCGAG
ACTAAGCCTG GTACCGTAGT TTGGTGTATG GGTGGTACTC AGCATCACGT CGGTAATGCT
AACACTCGTG CCTACTGTAT CCTTCAGCTT GCTCTGGGTA ACATGGGTGT TGCCGGTGGT
GGTACTAACA TCTTCCGTGG TCACGATAAC GTACAGGGCG CAACCGATTT CGGTCTGCTG
TTTGATACGC TACCTGGCTA CTACGGTCTT AAGACTGGCT CTTGGAAGCA CTGGTGTAAT
GTTTGGGATC TGGATTATGA GTGGGTTAAG AACCGCTTCG ATCAAGAAGA ACATTTAGGC
CAGGTTCCTA TGAACTCGAC CGGTATTCCA TGTTCTCGCT GGCATGACGG TGTACTCGAA
GACAAGTCTA AGATTGCACA GAAAGACAAT ATCCGCATGG CATTCTTCTG GGGTCAATCA
GTTAACACTG AAACCCGTGG CCGTGAGGTG CGTGAAGCGC TGGATAAGAT GGACACAGTT
GTTGTTGTCG ATCCATATCC AACAATGGCG GGTGTTATGC ACAATCGTAA AGATGGTGTA
TATCTACTTC CTGCAGCGAC TCAGTTTGAG ACTTACGGTT CTATCTCTGC ATCTAACCGC
TCACTGCAGT GGCGTACGCA GGTTATCGAG CCATTGTTCG AGTCTAAGCC AGATCACGTG
ATCATGTACA AGCTTGCTAA GAAATGGGGC ATCGAGAAAG AGTTCTGTAA GCATATTAAG
GTTAACGGCG ATGAGCCATT GATCGAAGAT ATGACCCGCG AATTCAACCG CGGTATGTGG
ACCATTGGTT ACACAGGCCA GAGCCCAGAG CGTTTAAAGA TGCATCAGGA AAACTGGGGT
ACCTTCGATA TTAAATCGCT TGAAGCACCA GGCGGCCCAG CTAAAGGTGA GACTTACGGT
CTACCTTGGC CTTGTTGGGG TACTCCGGAG CAGAAGCACC CTGGTTCACA GATCCTTTAC
CGTACCGATC GTGAAGTGAA GAACGGTGGT GGTAACTTCC GTGCACGTTA TGGTGTTGAG
CATAATGGTA ATAACATTCT TGCCGAAGGT TCTTACTCTA AAGGCGCTGA AATTCAGGAT
GGTTATCCAG AATTTACTGC TGACATGCTT AAGCAACTTG GCTGGTGGGA TGACCTGACG
GCTGAAGAGA AGAAGCACGC AGACGGTAAA AACTGGAAGA CTGATATTTC CGGTGGTATT
CAGCGTGTGG CTATCAAGCA TGGTTGTATG CCTTACGGTA ACGCAAAAGC GCGTTGTATC
GTTTGGAACT TCCCGGATGA TATTCCATTG CACCGTGAGC CACTCTATAC GCCTCGTCGT
GACTTGGTAT CTAAGTACCC AACTTACGAA GACCGTATGG TTGCACGTCT TCCTACCCTG
TATAAGACAA TTCAGGATCA GGATTTCGCC AAAGACTTCC CACTGGCACT GACCTCTGGT
CGATTAGTGG AATATGAAGG TGGTGGTGAA GAGACCCGTT GTAACCCTTG GCTAGCTGAA
CTTCAACAAG AGATGTTCAT CGAAATCAGC CCGGGTGATG CAGCGGATCG TGGTCTTCGT
GATGGTGACG ATGTTTGGGT TCACAGTCCG GAAGGCGCAA AAATTAAAGT TCAGGCCATG
GTAACTCCAC GCGTGATAAA TGGTGAGACC TTCATGCCAT ACCACTTCGC GGGTGTATTC
GAAGGTGAAA GCCTAGCGAA GAATTACCCT GAAGGTACAG TACCATATGT GATTGGCGAA
TCGGCTAACA CAGTATTGAC CTACGGCTAT GATGTTGTGA CTCAGATGCA AGAGACTAAG
TCTAGCTTGT GTCAGATCAC CAAAGCCTAA
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| Protein sequence | MRLTRKTDQA EVAKKPALGL NRRQFLQSAG LATGGIAAAS MLGAGMMRKA EAKEVPHNAP
TEIKRTICSH CSVGCGIYAE VQNGVWTGQE PAFDHPFNAG GHCAKGAALR EHGHGEKRLK
YPMKLEGGKW KKISWDQAIE EVGGKALDIR KESGPDSVFF MGSAKFSNEQ AYMYRKFAAM
WGTNNVDHSA RICHSTTVAG VANTWGYGAQ TNSFNDIRNA KAMMFIGSNP CEAHPVAMQH
ILEGKERGAK IIVVDPRFTR TAAKSDEFVH IRPGTDIPYI YGLLWHIFEN KWEDQTFIDQ
RVYGMERIRE EAAKWNPAEV ENVVGVPKEQ MYRVAKTLAE TKPGTVVWCM GGTQHHVGNA
NTRAYCILQL ALGNMGVAGG GTNIFRGHDN VQGATDFGLL FDTLPGYYGL KTGSWKHWCN
VWDLDYEWVK NRFDQEEHLG QVPMNSTGIP CSRWHDGVLE DKSKIAQKDN IRMAFFWGQS
VNTETRGREV REALDKMDTV VVVDPYPTMA GVMHNRKDGV YLLPAATQFE TYGSISASNR
SLQWRTQVIE PLFESKPDHV IMYKLAKKWG IEKEFCKHIK VNGDEPLIED MTREFNRGMW
TIGYTGQSPE RLKMHQENWG TFDIKSLEAP GGPAKGETYG LPWPCWGTPE QKHPGSQILY
RTDREVKNGG GNFRARYGVE HNGNNILAEG SYSKGAEIQD GYPEFTADML KQLGWWDDLT
AEEKKHADGK NWKTDISGGI QRVAIKHGCM PYGNAKARCI VWNFPDDIPL HREPLYTPRR
DLVSKYPTYE DRMVARLPTL YKTIQDQDFA KDFPLALTSG RLVEYEGGGE ETRCNPWLAE
LQQEMFIEIS PGDAADRGLR DGDDVWVHSP EGAKIKVQAM VTPRVINGET FMPYHFAGVF
EGESLAKNYP EGTVPYVIGE SANTVLTYGY DVVTQMQETK SSLCQITKA
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