| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4420 |
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| Symbol | |
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| ID | 5610522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5402649 |
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| End bp | 5403239 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935390 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001476150 |
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| Protein GI | 157377550 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTCA TGAAATTTCT GTGTGACACC AAACGCTGCA TCGAGTGTAA CGGTTGTGTC
ACTGCTTGTA AGAACGAAAA CGATTCCGCT CTCGAGTGGG GTATTCAACG TCGCCGCGTA
GTAACAATTA ACGATGGTGA GCCAGGTGAA GCATCTCTCT CAGTGGCTTG TATGCACTGT
ACCGATGCAC CTTGTCAGGC AGTTTGCCCA GCAAACTGTT TCTACAAGAC TGAAGACGGT
TTAACGCTAC ACAACAAAGA TACCTGTATC GGTTGTGGTT ACTGTCTATA CGCCTGCCCA
TTCGGCGCGC CTCAGTTCCC TAAGAAGGGT GCTTTTGGTA GCCGTGGCAA GATGGATAAG
TGTACTTTCT GTGCCGGTGG CCCGGAAGAG ACTCATTCAG ATGCTGAACG TCAGAAGTAC
GGTTCAAACC GTCTGGCTGA AGGTAAGTTG CCTATGTGTG CTGAACTTTG TGCAACTAAG
TCGCTGTTAG CGGGTGATGC AGATATCGTT TCAAGCATCT ATCGTGAGCG TATTGTTGCA
CGTGGTAATC CAAATGCGAT ATGGGGCTAT ACCCCTAAGA CTGGCGCGTA G
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| Protein sequence | MAVMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGEPGE ASLSVACMHC
TDAPCQAVCP ANCFYKTEDG LTLHNKDTCI GCGYCLYACP FGAPQFPKKG AFGSRGKMDK
CTFCAGGPEE THSDAERQKY GSNRLAEGKL PMCAELCATK SLLAGDADIV SSIYRERIVA
RGNPNAIWGY TPKTGA
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