| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4416 |
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| Symbol | |
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| ID | 5613025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5397290 |
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| End bp | 5397859 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935386 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001476146 |
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| Protein GI | 157377546 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACAA TGAAATTTTT GTGTGATACC AAGCGCTGCA TCGAGTGTAA TGGTTGTGTC
ACCGCTTGTA AGAACGAAAA CGACTCTGCT CTGGAATGGG GCATTCAACG TCGCCGCGTT
GTGACTATCA ATGATGGTCA ACCTGGTGAA GCATCTATCT CAGTGGCTTG TATGCACTGT
ACCGATGCAC CTTGTCAGGC AGTGTGTCCT GCGAACTGCT TCTACAAGAC TGAAGACGGT
TTAACGCTAC ACAACAAAGA TACCTGTATC GGTTGTGGTT ACTGCTTATA CGCTTGCCCA
TTCGGCGCGC CTCAGTTCCC TAAGAAGGGT GCTTTTGGTA GCCGTGGCAA GATGGATAAG
TGTACTTTCT GTGCCGGTGG TCCAGAAGAG AACCATTCAG ATGCAGAGCG TCAGAAGTAC
GGTTCAAACC GTATCGCCGA AGGTAAACTT CCAATGTGTG CTGAGCTATG TGCGACTAAG
TCGTTACTTG CGGGTGATGC TGAGATTGTC TCGTCAATCT ACCGTGAGCG TGTTGCATAC
CGTGGCTCTA AAAATGCAAT CTGGGGTTAA
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| Protein sequence | MATMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGQPGE ASISVACMHC
TDAPCQAVCP ANCFYKTEDG LTLHNKDTCI GCGYCLYACP FGAPQFPKKG AFGSRGKMDK
CTFCAGGPEE NHSDAERQKY GSNRIAEGKL PMCAELCATK SLLAGDAEIV SSIYRERVAY
RGSKNAIWG
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