| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4409 |
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| Symbol | |
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| ID | 5610782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5388391 |
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| End bp | 5389674 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935379 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001476139 |
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| Protein GI | 157377539 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.143276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAC TGTTTCTATT ATCTTATGGA ATCATCTTAA TCACCTTTTT TATCGCCATG
ATAGCGATGG ATCAGTTTGA GCTTTTTTCT ACCGATGAGA TTGAAGAAAT TTCATTCGGC
AATGACATCT CGGCAACCGC AGGTCTACTG ACAAAGATAG CCGAACTCAA AGGCCAAGCC
CAAGCCGAGC ATTCATTTAA AAAGTTCACG GAGAAGATGC ACTTAACCCT GGATACATAT
GAAACAACAA GTTCTGAAAT CAGTGCAGTG ATAAGATCTC ACCTCTTAGA GAGGAATTTT
TTTATCGAAG ATGCCGAGGA GAATATTGCC TACTTCACCT TTGGCGATAA GCAGAAAATC
TATCGTATAG CTTCTGATAT GAGCTCTCCT TTTATGCAGC AGATAAGTGA TAAGGAGTGG
CTTACACTAA TTGAGATCTG TACGGCACTC GCTATCATCA CTTTTATCGT GCTCTTCTTT
CTCGCCAGAA GGTTACGTCG GTTGGAGAAA ACCTATATCG CCTTCGCCGA TGGTGACTTT
ACCGCCAGGG CATCGACTAA GATGTTCCAT AACGTGGGTA AACTAAATCA AACTTTCAAT
ATTATGGCCG ACCGAATTTC ACAACTTATC AGTAGTAACC GAAACCTGAC TAACGCGGTT
GCACACGAGT TCAGAACCCC CATTTTCCGC ATTCAATGTA ATCTGGATAT GCTCGATGAT
TCAAAGGTGC GCCCAGACCA AATGCCTCAT CTGGAAGGGA TCCAATCGGA TCTGAATGAA
CTCAACAGCA TGGTCGAAGA GCTACTGCAC TTCTCTAAAC TGGAACGCCT GGATACCAGC
TTAGCACTGG AACCGACCGA CATAGGGAAC CTGCTTGAGA AGCAGCTTAA CCACCTTCAA
TTTGAAACCG AGGCTAAGCT CACACTAGAT GTCAGAGATA ACTGCATCGC CCCGGTATCG
GTGAGAGCAC TGCAGCGCGC ACTGGGGAAT GTCATCCGTA ATGGCTATAA ATATGCGAAC
TCTGAGGTGA GAATATCACT GCAGGCAAGC CCGGAAGAAC TTCACATTAC GATTGAAAAT
GACGGCCCGA ATATTCCCGT TAAAGACAGA GTAACCATTT TTGATCCCTT CGTACGCCTG
GACAGGTCGA GAGACAGGCA AAGCGGCGGA CATGGACTGG GTTTAGCGAT CACTAAGCAG
ATAATAAAGC AGCACAAGGG CCGCATCTAT ATCTCTGACA GCAATATGGG CGGAGCCTGT
TTTAATATCA AGCTACCATT ATGA
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| Protein sequence | MKRLFLLSYG IILITFFIAM IAMDQFELFS TDEIEEISFG NDISATAGLL TKIAELKGQA
QAEHSFKKFT EKMHLTLDTY ETTSSEISAV IRSHLLERNF FIEDAEENIA YFTFGDKQKI
YRIASDMSSP FMQQISDKEW LTLIEICTAL AIITFIVLFF LARRLRRLEK TYIAFADGDF
TARASTKMFH NVGKLNQTFN IMADRISQLI SSNRNLTNAV AHEFRTPIFR IQCNLDMLDD
SKVRPDQMPH LEGIQSDLNE LNSMVEELLH FSKLERLDTS LALEPTDIGN LLEKQLNHLQ
FETEAKLTLD VRDNCIAPVS VRALQRALGN VIRNGYKYAN SEVRISLQAS PEELHITIEN
DGPNIPVKDR VTIFDPFVRL DRSRDRQSGG HGLGLAITKQ IIKQHKGRIY ISDSNMGGAC
FNIKLPL
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