| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4398 |
|---|
| Symbol | |
|---|
| ID | 5610051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 5378512 |
|---|
| End bp | 5378976 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640935368 |
|---|
| Product | molybdopterin biosynthesis protein MoaE |
|---|
| Protein accession | YP_001476128 |
|---|
| Protein GI | 157377528 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0314] Molybdopterin converting factor, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0259139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000211704 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCAA ACTTGAATAA GGTTTTGGTA CAAACTGAAG ACTTTAGTGT GCCTGAAGAG
TACGCCCTGA TTGCCGATGA TAACAGTGAT GGAGCCGTGG TCACTTTCGT TGGTAAGGTC
AGAGATTTTA ATGACGGCAG CGTGGTTACC GACCTGACGT TGGAGCATTA TCCTGGCATG
ACAGAAGCTG TATTAAACCA GATTGCTGTC GAAGCGCGTG AGCGTTGGCC TTTGAATAAT
GTGACCATTA TTCATCGTGT CGGTACTATG GCACTGGGTG AGCAGATTGT GTTTATCGGT
GTGACCAGTG CTCACCGTAA AGCGGCATTT GCAGCTTGTG AGTTCTTGAT AGACTTTCTT
AAAACCAAGG CACCCTTCTG GAAGCTGGAA GCCGGTGAAA GTGGTAAGAG CTGGGTCGAA
GCGAAAGACG CCGATGAGCA AGCGGCTAAG ATGTGGGATA AGTAA
|
|---|
| Protein sequence | MSSNLNKVLV QTEDFSVPEE YALIADDNSD GAVVTFVGKV RDFNDGSVVT DLTLEHYPGM
TEAVLNQIAV EARERWPLNN VTIIHRVGTM ALGEQIVFIG VTSAHRKAAF AACEFLIDFL
KTKAPFWKLE AGESGKSWVE AKDADEQAAK MWDK
|
|---|
| |