| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4396 |
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| Symbol | |
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| ID | 5610049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5376963 |
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| End bp | 5377643 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935366 |
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| Product | molybdate ABC transporter, inner membrane subunit |
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| Protein accession | YP_001476126 |
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| Protein GI | 157377526 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4149] ABC-type molybdate transport system, permease component |
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| TIGRFAM ID | [TIGR02141] molybdate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00827136 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000786314 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATTGGG AAGCGCTCTG GTTATCGATT AAGCTGAGTA GTGTCACAGT ACTTATTTTG
ATCCCTTTCG CCATCTTGCT TAGCCGCTAT CTGGCGTATC ATCACTTTAC CGGTAAGTCG
TGGGTTGAAG CCTTGATCAT GGTGCCATTG GTGCTGCCGC CCACAGTGAT CGGATACTAT
TTGCTGGTGG GGCTTGGCAG TCAGTCCTGG CTTGGACGGC TGCTGGAAGA GCTATTAGGC
CATCAGCTGG TCTTTCATTT TTCCGGCTTG GTCGTTGCCT CTATTTTGGT CAATATTCCC
TTCGCGGTTC AGCCTATACA ACGTGCCTTC GAGGCGGTGC CTGAAGATGT CCGGGATGCC
GCAGCATGCT GCGGGATGAG TCGAATGAAG GTGCTTTTTA AGATTGAGCT CCCTATGGTA
TGGCCCGGTG TGTTGACCGC TTTGGTGCTG TGCTTCTCCC ATGTCTTAGG CGAATTTGGC
GTCGTCCTGA TGATGGGCGG CAATATTGCC GGAGAAACTA AGACCATCGC CATCTCCATC
TATGACAGTG TTCAGGCATT CGATTTTGCC AGTGCCGGAC AGATGTCTCT GGTGTTACTC
GTTTTTGCTG TAACCGTATT GGCATTTACC ACCAGTTTGT CCAGAAGTAT GGGAGCGGCA
CATGTCTCAA GACGTCGGTG A
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| Protein sequence | MDWEALWLSI KLSSVTVLIL IPFAILLSRY LAYHHFTGKS WVEALIMVPL VLPPTVIGYY
LLVGLGSQSW LGRLLEELLG HQLVFHFSGL VVASILVNIP FAVQPIQRAF EAVPEDVRDA
AACCGMSRMK VLFKIELPMV WPGVLTALVL CFSHVLGEFG VVLMMGGNIA GETKTIAISI
YDSVQAFDFA SAGQMSLVLL VFAVTVLAFT TSLSRSMGAA HVSRRR
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